Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PHF1O43189 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PHF1O43189 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
PHF1O43189 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
PHF1O43189 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PHF1O43189 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.21□□□□□ -0.13
PHF1O43189 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
PHF1O43189 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC14.21□□□□□ -0.13
PHF1O43189 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PHF1O43189 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC14.21□□□□□ -0.13
PHF1O43189 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.21□□□□□ -0.13
PHF1O43189 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PHF1O43189 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PHF1O43189 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
PHF1O43189 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PHF1O43189 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
PHF1O43189 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC14.21□□□□□ -0.13
PHF1O43189 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC14.21□□□□□ -0.13
PHF1O43189 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PHF1O43189 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PHF1O43189 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PHF1O43189 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PHF1O43189 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
PHF1O43189 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PHF1O43189 IGLL3P-201ENST00000412472 434 ntBASIC14.21□□□□□ -0.13
PHF1O43189 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC14.21□□□□□ -0.13
PHF1O43189 AC015922.1-201ENST00000421102 1152 ntBASIC14.21□□□□□ -0.13
PHF1O43189 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC14.21□□□□□ -0.13
PHF1O43189 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC14.21□□□□□ -0.13
PHF1O43189 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC14.21□□□□□ -0.13
PHF1O43189 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
PHF1O43189 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC14.21□□□□□ -0.13
PHF1O43189 CIPC-205ENST00000555437 566 ntTSL 3 BASIC14.21□□□□□ -0.13
PHF1O43189 AC025678.2-201ENST00000562061 970 ntBASIC14.21□□□□□ -0.13
PHF1O43189 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC14.21□□□□□ -0.13
PHF1O43189 AC005498.2-205ENST00000593218 784 ntBASIC14.21□□□□□ -0.13
PHF1O43189 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
PHF1O43189 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PHF1O43189 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC14.21□□□□□ -0.13
PHF1O43189 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PHF1O43189 AC092364.2-201ENST00000596710 2692 ntBASIC14.21□□□□□ -0.13
PHF1O43189 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
PHF1O43189 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PHF1O43189 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC14.21□□□□□ -0.13
PHF1O43189 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PHF1O43189 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PHF1O43189 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
PHF1O43189 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC14.21□□□□□ -0.14
PHF1O43189 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
PHF1O43189 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
PHF1O43189 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
PHF1O43189 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
PHF1O43189 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
PHF1O43189 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC14.2□□□□□ -0.14
PHF1O43189 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PHF1O43189 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PHF1O43189 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PHF1O43189 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PHF1O43189 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC14.2□□□□□ -0.14
PHF1O43189 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
PHF1O43189 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PHF1O43189 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PHF1O43189 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
PHF1O43189 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PHF1O43189 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
PHF1O43189 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC14.2□□□□□ -0.14
PHF1O43189 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
PHF1O43189 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC14.2□□□□□ -0.14
PHF1O43189 COPE-202ENST00000349893 948 ntTSL 2 BASIC14.2□□□□□ -0.14
PHF1O43189 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PHF1O43189 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PHF1O43189 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PHF1O43189 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC14.2□□□□□ -0.14
PHF1O43189 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC14.2□□□□□ -0.14
PHF1O43189 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC14.2□□□□□ -0.14
PHF1O43189 RPL28-205ENST00000558131 444 ntTSL 5 BASIC14.2□□□□□ -0.14
PHF1O43189 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC14.2□□□□□ -0.14
PHF1O43189 OR7E47P-204ENST00000575924 449 ntBASIC14.2□□□□□ -0.14
PHF1O43189 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC14.2□□□□□ -0.14
PHF1O43189 AC004835.2-201ENST00000603762 682 ntBASIC14.2□□□□□ -0.14
PHF1O43189 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC14.2□□□□□ -0.14
PHF1O43189 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC14.2□□□□□ -0.14
PHF1O43189 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
PHF1O43189 AC067930.6-201ENST00000623257 4947 ntBASIC14.2□□□□□ -0.14
PHF1O43189 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC14.2□□□□□ -0.14
PHF1O43189 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
PHF1O43189 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
PHF1O43189 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
PHF1O43189 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PHF1O43189 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
PHF1O43189 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PHF1O43189 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PHF1O43189 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PHF1O43189 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PHF1O43189 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC14.2□□□□□ -0.14
PHF1O43189 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PHF1O43189 GOLGA6L17P-202ENST00000614358 1398 ntBASIC14.2□□□□□ -0.14
PHF1O43189 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC14.2□□□□□ -0.14
PHF1O43189 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
PHF1O43189 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms