Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CHD2O14647 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CHD2O14647 AL138709.1-201ENST00000614840 1693 ntBASIC22.23■■□□□ 1.15
CHD2O14647 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
CHD2O14647 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC22.23■■□□□ 1.15
CHD2O14647 AL390961.4-201ENST00000623958 2535 ntBASIC22.23■■□□□ 1.15
CHD2O14647 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
CHD2O14647 AHCYP2-201ENST00000430630 1300 ntBASIC22.23■■□□□ 1.15
CHD2O14647 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CHD2O14647 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CHD2O14647 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC22.22■■□□□ 1.15
CHD2O14647 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC22.22■■□□□ 1.15
CHD2O14647 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CHD2O14647 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC22.22■■□□□ 1.15
CHD2O14647 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC22.22■■□□□ 1.15
CHD2O14647 MIR4722-201ENST00000578292 60 ntBASIC22.22■■□□□ 1.15
CHD2O14647 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC22.22■■□□□ 1.15
CHD2O14647 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC22.22■■□□□ 1.15
CHD2O14647 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC22.22■■□□□ 1.15
CHD2O14647 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC22.22■■□□□ 1.15
CHD2O14647 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC22.22■■□□□ 1.15
CHD2O14647 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CHD2O14647 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CHD2O14647 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
CHD2O14647 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
CHD2O14647 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC22.22■■□□□ 1.15
CHD2O14647 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CHD2O14647 HOMER2P2-201ENST00000451621 847 ntBASIC22.22■■□□□ 1.15
CHD2O14647 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC22.22■■□□□ 1.15
CHD2O14647 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CHD2O14647 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC22.22■■□□□ 1.15
CHD2O14647 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC22.22■■□□□ 1.15
CHD2O14647 MIR4706-201ENST00000582134 82 ntBASIC22.22■■□□□ 1.15
CHD2O14647 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC22.22■■□□□ 1.15
CHD2O14647 EEF1DP1-201ENST00000585891 896 ntBASIC22.22■■□□□ 1.15
CHD2O14647 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CHD2O14647 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
CHD2O14647 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC22.22■■□□□ 1.15
CHD2O14647 AC138627.1-207ENST00000641560 1006 ntBASIC22.22■■□□□ 1.15
CHD2O14647 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC22.22■■□□□ 1.15
CHD2O14647 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC22.22■■□□□ 1.15
CHD2O14647 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
CHD2O14647 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC22.21■■□□□ 1.15
CHD2O14647 LINC01144-201ENST00000626198 1710 ntBASIC22.21■■□□□ 1.15
CHD2O14647 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CHD2O14647 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CHD2O14647 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CHD2O14647 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CHD2O14647 TP73-209ENST00000603362 1668 ntTSL 5 BASIC22.21■■□□□ 1.15
CHD2O14647 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CHD2O14647 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CHD2O14647 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
CHD2O14647 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
CHD2O14647 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CHD2O14647 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
CHD2O14647 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CHD2O14647 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CHD2O14647 FAM197Y7-201ENST00000432892 766 ntBASIC22.21■■□□□ 1.15
CHD2O14647 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CHD2O14647 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC22.21■■□□□ 1.15
CHD2O14647 TMEM198B-204ENST00000484016 896 ntBASIC22.21■■□□□ 1.15
CHD2O14647 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC22.21■■□□□ 1.15
CHD2O14647 AC020914.3-201ENST00000594712 304 ntBASIC22.21■■□□□ 1.15
CHD2O14647 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC22.21■■□□□ 1.15
CHD2O14647 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CHD2O14647 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC22.21■■□□□ 1.15
CHD2O14647 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC22.21■■□□□ 1.15
CHD2O14647 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
CHD2O14647 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CHD2O14647 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
CHD2O14647 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
CHD2O14647 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC22.2■■□□□ 1.14
CHD2O14647 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CHD2O14647 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CHD2O14647 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CHD2O14647 AL662890.1-201ENST00000396818 632 ntBASIC22.2■■□□□ 1.14
CHD2O14647 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CHD2O14647 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
CHD2O14647 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC22.2■■□□□ 1.14
CHD2O14647 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
CHD2O14647 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
CHD2O14647 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CHD2O14647 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CHD2O14647 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC22.2■■□□□ 1.14
CHD2O14647 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
CHD2O14647 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
CHD2O14647 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
CHD2O14647 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC22.2■■□□□ 1.14
CHD2O14647 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC22.2■■□□□ 1.14
CHD2O14647 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
CHD2O14647 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC22.2■■□□□ 1.14
CHD2O14647 AC104457.1-201ENST00000401024 814 ntBASIC22.2■■□□□ 1.14
CHD2O14647 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC22.2■■□□□ 1.14
CHD2O14647 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC22.2■■□□□ 1.14
CHD2O14647 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
CHD2O14647 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CHD2O14647 SPCS2P2-201ENST00000603270 608 ntBASIC22.2■■□□□ 1.14
CHD2O14647 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
CHD2O14647 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
CHD2O14647 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms