Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
NPIPA2E9PIF3 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
NPIPA2E9PIF3 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
NPIPA2E9PIF3 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC14.92□□□□□ -0.02
NPIPA2E9PIF3 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NPIPA2E9PIF3 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NPIPA2E9PIF3 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC14.92□□□□□ -0.02
NPIPA2E9PIF3 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NPIPA2E9PIF3 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC14.92□□□□□ -0.02
NPIPA2E9PIF3 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NPIPA2E9PIF3 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.92□□□□□ -0.02
NPIPA2E9PIF3 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC14.92□□□□□ -0.02
NPIPA2E9PIF3 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NPIPA2E9PIF3 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.92□□□□□ -0.02
NPIPA2E9PIF3 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC14.92□□□□□ -0.02
NPIPA2E9PIF3 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NPIPA2E9PIF3 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.92□□□□□ -0.02
NPIPA2E9PIF3 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC14.92□□□□□ -0.02
NPIPA2E9PIF3 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC14.92□□□□□ -0.02
NPIPA2E9PIF3 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NPIPA2E9PIF3 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NPIPA2E9PIF3 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
NPIPA2E9PIF3 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NPIPA2E9PIF3 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC14.92□□□□□ -0.02
NPIPA2E9PIF3 CA12-203ENST00000422263 2556 ntTSL 2 BASIC14.92□□□□□ -0.02
NPIPA2E9PIF3 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NPIPA2E9PIF3 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NPIPA2E9PIF3 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
NPIPA2E9PIF3 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NPIPA2E9PIF3 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC14.92□□□□□ -0.02
NPIPA2E9PIF3 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.92□□□□□ -0.02
NPIPA2E9PIF3 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NPIPA2E9PIF3 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NPIPA2E9PIF3 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.92□□□□□ -0.02
NPIPA2E9PIF3 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NPIPA2E9PIF3 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
NPIPA2E9PIF3 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
NPIPA2E9PIF3 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
NPIPA2E9PIF3 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NPIPA2E9PIF3 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NPIPA2E9PIF3 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NPIPA2E9PIF3 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NPIPA2E9PIF3 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
NPIPA2E9PIF3 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC14.91□□□□□ -0.02
NPIPA2E9PIF3 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
NPIPA2E9PIF3 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NPIPA2E9PIF3 UBALD1-205ENST00000590891 2641 ntBASIC14.91□□□□□ -0.02
NPIPA2E9PIF3 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC14.91□□□□□ -0.02
NPIPA2E9PIF3 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NPIPA2E9PIF3 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NPIPA2E9PIF3 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
NPIPA2E9PIF3 CD81-202ENST00000381036 880 ntTSL 3 BASIC14.91□□□□□ -0.02
NPIPA2E9PIF3 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC14.91□□□□□ -0.02
NPIPA2E9PIF3 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC14.91□□□□□ -0.02
NPIPA2E9PIF3 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC14.91□□□□□ -0.02
NPIPA2E9PIF3 AC105233.2-201ENST00000523697 349 ntBASIC14.91□□□□□ -0.02
NPIPA2E9PIF3 AF228730.5-201ENST00000530288 346 ntBASIC14.91□□□□□ -0.02
NPIPA2E9PIF3 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.91□□□□□ -0.02
NPIPA2E9PIF3 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NPIPA2E9PIF3 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC14.91□□□□□ -0.02
NPIPA2E9PIF3 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC14.91□□□□□ -0.02
NPIPA2E9PIF3 MIR4453-201ENST00000584019 89 ntBASIC14.91□□□□□ -0.02
NPIPA2E9PIF3 AL390754.1-201ENST00000619088 582 ntBASIC14.91□□□□□ -0.02
NPIPA2E9PIF3 AJ011932.1-201ENST00000621707 465 ntBASIC14.91□□□□□ -0.02
NPIPA2E9PIF3 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NPIPA2E9PIF3 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NPIPA2E9PIF3 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NPIPA2E9PIF3 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NPIPA2E9PIF3 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NPIPA2E9PIF3 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NPIPA2E9PIF3 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NPIPA2E9PIF3 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NPIPA2E9PIF3 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NPIPA2E9PIF3 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NPIPA2E9PIF3 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
NPIPA2E9PIF3 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NPIPA2E9PIF3 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NPIPA2E9PIF3 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
NPIPA2E9PIF3 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NPIPA2E9PIF3 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.9□□□□□ -0.02
NPIPA2E9PIF3 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NPIPA2E9PIF3 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
NPIPA2E9PIF3 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
NPIPA2E9PIF3 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
NPIPA2E9PIF3 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NPIPA2E9PIF3 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
NPIPA2E9PIF3 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
NPIPA2E9PIF3 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NPIPA2E9PIF3 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
NPIPA2E9PIF3 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC14.9□□□□□ -0.02
NPIPA2E9PIF3 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
NPIPA2E9PIF3 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
NPIPA2E9PIF3 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.9□□□□□ -0.02
NPIPA2E9PIF3 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.9□□□□□ -0.02
NPIPA2E9PIF3 AL512638.1-201ENST00000457493 794 ntBASIC14.9□□□□□ -0.02
NPIPA2E9PIF3 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.9□□□□□ -0.02
NPIPA2E9PIF3 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC14.9□□□□□ -0.02
NPIPA2E9PIF3 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC14.9□□□□□ -0.02
NPIPA2E9PIF3 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC14.9□□□□□ -0.02
NPIPA2E9PIF3 AC069120.2-201ENST00000524091 540 ntBASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms