Protein–RNA interactions for Protein: A8K830

COLCA2, Colorectal cancer-associated protein 2, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2A8K830 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
COLCA2A8K830 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC12.53□□□□□ -0.4
COLCA2A8K830 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
COLCA2A8K830 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC12.53□□□□□ -0.4
COLCA2A8K830 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
COLCA2A8K830 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
COLCA2A8K830 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
COLCA2A8K830 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC12.53□□□□□ -0.4
COLCA2A8K830 AL021920.2-201ENST00000624828 1351 ntBASIC12.53□□□□□ -0.4
COLCA2A8K830 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
COLCA2A8K830 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
COLCA2A8K830 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC12.53□□□□□ -0.4
COLCA2A8K830 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
COLCA2A8K830 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
COLCA2A8K830 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
COLCA2A8K830 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC12.53□□□□□ -0.4
COLCA2A8K830 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
COLCA2A8K830 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
COLCA2A8K830 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC12.53□□□□□ -0.4
COLCA2A8K830 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC12.52□□□□□ -0.4
COLCA2A8K830 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
COLCA2A8K830 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
COLCA2A8K830 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC12.52□□□□□ -0.4
COLCA2A8K830 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
COLCA2A8K830 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
COLCA2A8K830 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
COLCA2A8K830 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
COLCA2A8K830 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.4
COLCA2A8K830 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
COLCA2A8K830 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC12.52□□□□□ -0.4
COLCA2A8K830 AC097376.2-205ENST00000610159 5334 ntBASIC12.52□□□□□ -0.4
COLCA2A8K830 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.4
COLCA2A8K830 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
COLCA2A8K830 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.4
COLCA2A8K830 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
COLCA2A8K830 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
COLCA2A8K830 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
COLCA2A8K830 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
COLCA2A8K830 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
COLCA2A8K830 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
COLCA2A8K830 INTS4P1-203ENST00000641008 3683 ntBASIC12.52□□□□□ -0.41
COLCA2A8K830 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
COLCA2A8K830 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
COLCA2A8K830 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC12.52□□□□□ -0.41
COLCA2A8K830 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
COLCA2A8K830 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
COLCA2A8K830 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
COLCA2A8K830 FAM207BP-201ENST00000447172 505 ntBASIC12.52□□□□□ -0.41
COLCA2A8K830 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC12.52□□□□□ -0.41
COLCA2A8K830 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
COLCA2A8K830 AC112698.1-201ENST00000510299 916 ntBASIC12.52□□□□□ -0.41
COLCA2A8K830 PRKY-204ENST00000533551 1019 ntBASIC12.52□□□□□ -0.41
COLCA2A8K830 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
COLCA2A8K830 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
COLCA2A8K830 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
COLCA2A8K830 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC12.52□□□□□ -0.41
COLCA2A8K830 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
COLCA2A8K830 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
COLCA2A8K830 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
COLCA2A8K830 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
COLCA2A8K830 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC12.52□□□□□ -0.41
COLCA2A8K830 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
COLCA2A8K830 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
COLCA2A8K830 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
COLCA2A8K830 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC12.52□□□□□ -0.41
COLCA2A8K830 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC12.52□□□□□ -0.41
COLCA2A8K830 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
COLCA2A8K830 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
COLCA2A8K830 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
COLCA2A8K830 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
COLCA2A8K830 AC131902.2-201ENST00000566892 2172 ntBASIC12.52□□□□□ -0.41
COLCA2A8K830 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
COLCA2A8K830 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
COLCA2A8K830 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
COLCA2A8K830 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
COLCA2A8K830 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
COLCA2A8K830 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC12.52□□□□□ -0.41
COLCA2A8K830 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
COLCA2A8K830 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
COLCA2A8K830 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
COLCA2A8K830 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
COLCA2A8K830 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
COLCA2A8K830 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
COLCA2A8K830 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
COLCA2A8K830 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
COLCA2A8K830 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
COLCA2A8K830 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC12.51□□□□□ -0.41
COLCA2A8K830 FLJ16779-201ENST00000612722 7638 ntBASIC12.51□□□□□ -0.41
COLCA2A8K830 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
COLCA2A8K830 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
COLCA2A8K830 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC12.51□□□□□ -0.41
COLCA2A8K830 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC12.51□□□□□ -0.41
COLCA2A8K830 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC12.51□□□□□ -0.41
COLCA2A8K830 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC12.51□□□□□ -0.41
COLCA2A8K830 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC12.51□□□□□ -0.41
COLCA2A8K830 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC12.51□□□□□ -0.41
COLCA2A8K830 AC010240.3-201ENST00000607688 395 ntBASIC12.51□□□□□ -0.41
COLCA2A8K830 RAB43-208ENST00000615093 783 ntTSL 5 BASIC12.51□□□□□ -0.41
COLCA2A8K830 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
COLCA2A8K830 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms