Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
PTPDC1A2A3K4 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTPDC1A2A3K4 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC19.23■□□□□ 0.67
PTPDC1A2A3K4 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTPDC1A2A3K4 SP100-205ENST00000409824 1802 ntTSL 5 BASIC19.23■□□□□ 0.67
PTPDC1A2A3K4 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTPDC1A2A3K4 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PTPDC1A2A3K4 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
PTPDC1A2A3K4 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTPDC1A2A3K4 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PTPDC1A2A3K4 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
PTPDC1A2A3K4 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTPDC1A2A3K4 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
PTPDC1A2A3K4 PMS2P4-201ENST00000412466 1052 ntBASIC19.23■□□□□ 0.67
PTPDC1A2A3K4 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC19.23■□□□□ 0.67
PTPDC1A2A3K4 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
PTPDC1A2A3K4 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
PTPDC1A2A3K4 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
PTPDC1A2A3K4 AC109635.5-201ENST00000533593 962 ntBASIC19.23■□□□□ 0.67
PTPDC1A2A3K4 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC19.23■□□□□ 0.67
PTPDC1A2A3K4 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PTPDC1A2A3K4 AC009093.7-201ENST00000623853 1223 ntBASIC19.23■□□□□ 0.67
PTPDC1A2A3K4 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PTPDC1A2A3K4 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC19.23■□□□□ 0.67
PTPDC1A2A3K4 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC19.23■□□□□ 0.67
PTPDC1A2A3K4 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
PTPDC1A2A3K4 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC19.23■□□□□ 0.67
PTPDC1A2A3K4 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTPDC1A2A3K4 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC19.23■□□□□ 0.67
PTPDC1A2A3K4 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC19.23■□□□□ 0.67
PTPDC1A2A3K4 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC19.23■□□□□ 0.67
PTPDC1A2A3K4 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTPDC1A2A3K4 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTPDC1A2A3K4 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC19.22■□□□□ 0.67
PTPDC1A2A3K4 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC19.22■□□□□ 0.67
PTPDC1A2A3K4 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC19.22■□□□□ 0.67
PTPDC1A2A3K4 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
PTPDC1A2A3K4 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTPDC1A2A3K4 PGR-209ENST00000617858 2816 ntTSL 5 BASIC19.22■□□□□ 0.67
PTPDC1A2A3K4 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
PTPDC1A2A3K4 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTPDC1A2A3K4 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
PTPDC1A2A3K4 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTPDC1A2A3K4 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC19.22■□□□□ 0.67
PTPDC1A2A3K4 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC19.22■□□□□ 0.67
PTPDC1A2A3K4 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC19.22■□□□□ 0.67
PTPDC1A2A3K4 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTPDC1A2A3K4 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC19.22■□□□□ 0.67
PTPDC1A2A3K4 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC19.22■□□□□ 0.67
PTPDC1A2A3K4 AC092474.2-201ENST00000424288 719 ntBASIC19.22■□□□□ 0.67
PTPDC1A2A3K4 KRT18P32-201ENST00000424695 1287 ntBASIC19.22■□□□□ 0.67
PTPDC1A2A3K4 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PTPDC1A2A3K4 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
PTPDC1A2A3K4 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC19.22■□□□□ 0.67
PTPDC1A2A3K4 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC19.22■□□□□ 0.67
PTPDC1A2A3K4 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC19.22■□□□□ 0.67
PTPDC1A2A3K4 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC19.22■□□□□ 0.67
PTPDC1A2A3K4 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTPDC1A2A3K4 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTPDC1A2A3K4 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTPDC1A2A3K4 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
PTPDC1A2A3K4 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC19.22■□□□□ 0.67
PTPDC1A2A3K4 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTPDC1A2A3K4 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTPDC1A2A3K4 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC19.22■□□□□ 0.67
PTPDC1A2A3K4 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTPDC1A2A3K4 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC19.22■□□□□ 0.67
PTPDC1A2A3K4 AC024909.3-201ENST00000611513 2257 ntBASIC19.22■□□□□ 0.67
PTPDC1A2A3K4 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC19.22■□□□□ 0.67
PTPDC1A2A3K4 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTPDC1A2A3K4 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
PTPDC1A2A3K4 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
PTPDC1A2A3K4 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC19.22■□□□□ 0.67
PTPDC1A2A3K4 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
PTPDC1A2A3K4 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
PTPDC1A2A3K4 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTPDC1A2A3K4 AC008894.3-201ENST00000624324 3103 ntBASIC19.21■□□□□ 0.67
PTPDC1A2A3K4 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTPDC1A2A3K4 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC19.21■□□□□ 0.67
PTPDC1A2A3K4 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC19.21■□□□□ 0.67
PTPDC1A2A3K4 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
PTPDC1A2A3K4 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTPDC1A2A3K4 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
PTPDC1A2A3K4 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PTPDC1A2A3K4 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PTPDC1A2A3K4 HNRNPFP1-201ENST00000391730 1133 ntBASIC19.21■□□□□ 0.67
PTPDC1A2A3K4 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC19.21■□□□□ 0.67
PTPDC1A2A3K4 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC19.21■□□□□ 0.67
PTPDC1A2A3K4 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
PTPDC1A2A3K4 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PTPDC1A2A3K4 AC069335.1-201ENST00000489972 472 ntBASIC19.21■□□□□ 0.67
PTPDC1A2A3K4 IGHV3-62-201ENST00000520057 340 ntBASIC19.21■□□□□ 0.67
PTPDC1A2A3K4 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC19.21■□□□□ 0.67
PTPDC1A2A3K4 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTPDC1A2A3K4 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PTPDC1A2A3K4 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PTPDC1A2A3K4 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC19.21■□□□□ 0.67
PTPDC1A2A3K4 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PTPDC1A2A3K4 RPL28-205ENST00000558131 444 ntTSL 5 BASIC19.21■□□□□ 0.67
PTPDC1A2A3K4 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms