Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
RAI2Q9Y5P3 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.55■□□□□ 0.24
RAI2Q9Y5P3 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAI2Q9Y5P3 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAI2Q9Y5P3 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAI2Q9Y5P3 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RAI2Q9Y5P3 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.55■□□□□ 0.24
RAI2Q9Y5P3 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
RAI2Q9Y5P3 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.55■□□□□ 0.24
RAI2Q9Y5P3 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
RAI2Q9Y5P3 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAI2Q9Y5P3 AC124067.4-201ENST00000519691 2379 ntBASIC16.55■□□□□ 0.24
RAI2Q9Y5P3 PCDHB19P-201ENST00000570871 2371 ntBASIC16.55■□□□□ 0.24
RAI2Q9Y5P3 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RAI2Q9Y5P3 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RAI2Q9Y5P3 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.55■□□□□ 0.24
RAI2Q9Y5P3 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.55■□□□□ 0.24
RAI2Q9Y5P3 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.55■□□□□ 0.24
RAI2Q9Y5P3 AC142381.1-201ENST00000426099 345 ntBASIC16.55■□□□□ 0.24
RAI2Q9Y5P3 GSAP-205ENST00000430584 600 ntTSL 5 BASIC16.55■□□□□ 0.24
RAI2Q9Y5P3 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.55■□□□□ 0.24
RAI2Q9Y5P3 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.55■□□□□ 0.24
RAI2Q9Y5P3 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.55■□□□□ 0.24
RAI2Q9Y5P3 DUT-210ENST00000559935 569 ntTSL 3 BASIC16.55■□□□□ 0.24
RAI2Q9Y5P3 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.55■□□□□ 0.24
RAI2Q9Y5P3 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC16.55■□□□□ 0.24
RAI2Q9Y5P3 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC16.55■□□□□ 0.24
RAI2Q9Y5P3 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.55■□□□□ 0.24
RAI2Q9Y5P3 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.55■□□□□ 0.24
RAI2Q9Y5P3 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.55■□□□□ 0.24
RAI2Q9Y5P3 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RAI2Q9Y5P3 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.55■□□□□ 0.24
RAI2Q9Y5P3 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
RAI2Q9Y5P3 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RAI2Q9Y5P3 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.55■□□□□ 0.24
RAI2Q9Y5P3 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RAI2Q9Y5P3 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.55■□□□□ 0.24
RAI2Q9Y5P3 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RAI2Q9Y5P3 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.55■□□□□ 0.24
RAI2Q9Y5P3 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RAI2Q9Y5P3 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAI2Q9Y5P3 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.55■□□□□ 0.24
RAI2Q9Y5P3 FOXO1B-201ENST00000504678 1527 ntBASIC16.55■□□□□ 0.24
RAI2Q9Y5P3 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
RAI2Q9Y5P3 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.54■□□□□ 0.24
RAI2Q9Y5P3 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RAI2Q9Y5P3 U82695.1-201ENST00000635752 1889 ntBASIC16.54■□□□□ 0.24
RAI2Q9Y5P3 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.54■□□□□ 0.24
RAI2Q9Y5P3 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
RAI2Q9Y5P3 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.54■□□□□ 0.24
RAI2Q9Y5P3 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.54■□□□□ 0.24
RAI2Q9Y5P3 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
RAI2Q9Y5P3 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAI2Q9Y5P3 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAI2Q9Y5P3 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.54■□□□□ 0.24
RAI2Q9Y5P3 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAI2Q9Y5P3 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.54■□□□□ 0.24
RAI2Q9Y5P3 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAI2Q9Y5P3 PCDH8P1-201ENST00000428983 2773 ntBASIC16.54■□□□□ 0.24
RAI2Q9Y5P3 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RAI2Q9Y5P3 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.54■□□□□ 0.24
RAI2Q9Y5P3 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.54■□□□□ 0.24
RAI2Q9Y5P3 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RAI2Q9Y5P3 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.54■□□□□ 0.24
RAI2Q9Y5P3 AL627223.1-201ENST00000416693 442 ntBASIC16.54■□□□□ 0.24
RAI2Q9Y5P3 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC16.54■□□□□ 0.24
RAI2Q9Y5P3 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.54■□□□□ 0.24
RAI2Q9Y5P3 SLC25A39P2-201ENST00000537614 270 ntBASIC16.54■□□□□ 0.24
RAI2Q9Y5P3 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.54■□□□□ 0.24
RAI2Q9Y5P3 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.54■□□□□ 0.24
RAI2Q9Y5P3 SPTSSB-204ENST00000617024 1292 ntBASIC16.54■□□□□ 0.24
RAI2Q9Y5P3 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAI2Q9Y5P3 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAI2Q9Y5P3 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
RAI2Q9Y5P3 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RAI2Q9Y5P3 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAI2Q9Y5P3 REXO1L8P-201ENST00000604378 1897 ntBASIC16.54■□□□□ 0.24
RAI2Q9Y5P3 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAI2Q9Y5P3 AL589702.1-201ENST00000641229 1509 ntBASIC16.54■□□□□ 0.24
RAI2Q9Y5P3 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.54■□□□□ 0.24
RAI2Q9Y5P3 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.54■□□□□ 0.24
RAI2Q9Y5P3 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RAI2Q9Y5P3 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAI2Q9Y5P3 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAI2Q9Y5P3 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
RAI2Q9Y5P3 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAI2Q9Y5P3 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAI2Q9Y5P3 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAI2Q9Y5P3 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.53■□□□□ 0.24
RAI2Q9Y5P3 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAI2Q9Y5P3 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAI2Q9Y5P3 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.53■□□□□ 0.24
RAI2Q9Y5P3 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAI2Q9Y5P3 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAI2Q9Y5P3 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAI2Q9Y5P3 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RAI2Q9Y5P3 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.53■□□□□ 0.24
RAI2Q9Y5P3 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RAI2Q9Y5P3 FAM58DP-201ENST00000428076 619 ntBASIC16.53■□□□□ 0.24
RAI2Q9Y5P3 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms