Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
PCDHB1Q9Y5F3 FAM86C2P-203ENST00000528684 1004 ntBASIC16.37■□□□□ 0.21
PCDHB1Q9Y5F3 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.37■□□□□ 0.21
PCDHB1Q9Y5F3 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
PCDHB1Q9Y5F3 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.37■□□□□ 0.21
PCDHB1Q9Y5F3 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
PCDHB1Q9Y5F3 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHB1Q9Y5F3 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHB1Q9Y5F3 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHB1Q9Y5F3 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.37■□□□□ 0.21
PCDHB1Q9Y5F3 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHB1Q9Y5F3 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.37■□□□□ 0.21
PCDHB1Q9Y5F3 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHB1Q9Y5F3 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHB1Q9Y5F3 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHB1Q9Y5F3 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHB1Q9Y5F3 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
PCDHB1Q9Y5F3 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.36■□□□□ 0.21
PCDHB1Q9Y5F3 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
PCDHB1Q9Y5F3 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHB1Q9Y5F3 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHB1Q9Y5F3 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.36■□□□□ 0.21
PCDHB1Q9Y5F3 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHB1Q9Y5F3 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHB1Q9Y5F3 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHB1Q9Y5F3 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHB1Q9Y5F3 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHB1Q9Y5F3 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHB1Q9Y5F3 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHB1Q9Y5F3 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDHB1Q9Y5F3 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.36■□□□□ 0.21
PCDHB1Q9Y5F3 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHB1Q9Y5F3 MIR943-201ENST00000401286 94 ntBASIC16.36■□□□□ 0.21
PCDHB1Q9Y5F3 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.36■□□□□ 0.21
PCDHB1Q9Y5F3 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDHB1Q9Y5F3 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.36■□□□□ 0.21
PCDHB1Q9Y5F3 AC055876.3-201ENST00000431496 288 ntBASIC16.36■□□□□ 0.21
PCDHB1Q9Y5F3 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHB1Q9Y5F3 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHB1Q9Y5F3 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHB1Q9Y5F3 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHB1Q9Y5F3 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHB1Q9Y5F3 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.36■□□□□ 0.21
PCDHB1Q9Y5F3 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDHB1Q9Y5F3 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.36■□□□□ 0.21
PCDHB1Q9Y5F3 AC051619.7-201ENST00000568314 623 ntBASIC16.36■□□□□ 0.21
PCDHB1Q9Y5F3 NAA60-208ENST00000570819 833 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDHB1Q9Y5F3 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDHB1Q9Y5F3 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.36■□□□□ 0.21
PCDHB1Q9Y5F3 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHB1Q9Y5F3 AC138649.4-201ENST00000612222 287 ntBASIC16.36■□□□□ 0.21
PCDHB1Q9Y5F3 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.36■□□□□ 0.21
PCDHB1Q9Y5F3 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDHB1Q9Y5F3 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
PCDHB1Q9Y5F3 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHB1Q9Y5F3 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHB1Q9Y5F3 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
PCDHB1Q9Y5F3 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHB1Q9Y5F3 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
PCDHB1Q9Y5F3 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHB1Q9Y5F3 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
PCDHB1Q9Y5F3 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.36■□□□□ 0.21
PCDHB1Q9Y5F3 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDHB1Q9Y5F3 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
PCDHB1Q9Y5F3 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDHB1Q9Y5F3 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDHB1Q9Y5F3 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHB1Q9Y5F3 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHB1Q9Y5F3 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
PCDHB1Q9Y5F3 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.35■□□□□ 0.21
PCDHB1Q9Y5F3 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
PCDHB1Q9Y5F3 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
PCDHB1Q9Y5F3 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHB1Q9Y5F3 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHB1Q9Y5F3 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHB1Q9Y5F3 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.35■□□□□ 0.21
PCDHB1Q9Y5F3 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHB1Q9Y5F3 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.35■□□□□ 0.21
PCDHB1Q9Y5F3 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHB1Q9Y5F3 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHB1Q9Y5F3 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHB1Q9Y5F3 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHB1Q9Y5F3 AL662844.4-201ENST00000606367 2838 ntBASIC16.35■□□□□ 0.21
PCDHB1Q9Y5F3 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.35■□□□□ 0.21
PCDHB1Q9Y5F3 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHB1Q9Y5F3 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHB1Q9Y5F3 DOC2GP-204ENST00000639052 2548 ntBASIC16.35■□□□□ 0.21
PCDHB1Q9Y5F3 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.35■□□□□ 0.21
PCDHB1Q9Y5F3 TFAMP1-201ENST00000412727 736 ntBASIC16.35■□□□□ 0.21
PCDHB1Q9Y5F3 BASP1P1-201ENST00000430708 665 ntBASIC16.35■□□□□ 0.21
PCDHB1Q9Y5F3 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.35■□□□□ 0.21
PCDHB1Q9Y5F3 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHB1Q9Y5F3 AC069335.1-201ENST00000489972 472 ntBASIC16.35■□□□□ 0.21
PCDHB1Q9Y5F3 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC16.35■□□□□ 0.21
PCDHB1Q9Y5F3 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.35■□□□□ 0.21
PCDHB1Q9Y5F3 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.35■□□□□ 0.21
PCDHB1Q9Y5F3 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHB1Q9Y5F3 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHB1Q9Y5F3 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.35■□□□□ 0.21
PCDHB1Q9Y5F3 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 120.7 ms