Protein–RNA interactions for Protein: Q9UJT0

TUBE1, Tubulin epsilon chain, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1Q9UJT0 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
TUBE1Q9UJT0 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TUBE1Q9UJT0 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC18.66■□□□□ 0.58
TUBE1Q9UJT0 U1.21-201ENST00000580816 167 ntBASIC18.66■□□□□ 0.58
TUBE1Q9UJT0 AL031055.1-201ENST00000606362 631 ntBASIC18.66■□□□□ 0.58
TUBE1Q9UJT0 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC18.66■□□□□ 0.58
TUBE1Q9UJT0 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TUBE1Q9UJT0 PCGF3-213ENST00000620529 1899 ntBASIC18.66■□□□□ 0.58
TUBE1Q9UJT0 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TUBE1Q9UJT0 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TUBE1Q9UJT0 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
TUBE1Q9UJT0 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TUBE1Q9UJT0 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TUBE1Q9UJT0 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
TUBE1Q9UJT0 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TUBE1Q9UJT0 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TUBE1Q9UJT0 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
TUBE1Q9UJT0 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TUBE1Q9UJT0 LINC01144-201ENST00000626198 1710 ntBASIC18.66■□□□□ 0.58
TUBE1Q9UJT0 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TUBE1Q9UJT0 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TUBE1Q9UJT0 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
TUBE1Q9UJT0 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TUBE1Q9UJT0 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TUBE1Q9UJT0 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TUBE1Q9UJT0 AC010491.1-201ENST00000563101 2797 ntBASIC18.65■□□□□ 0.58
TUBE1Q9UJT0 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
TUBE1Q9UJT0 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TUBE1Q9UJT0 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC18.65■□□□□ 0.58
TUBE1Q9UJT0 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
TUBE1Q9UJT0 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC18.65■□□□□ 0.58
TUBE1Q9UJT0 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TUBE1Q9UJT0 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TUBE1Q9UJT0 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TUBE1Q9UJT0 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TUBE1Q9UJT0 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TUBE1Q9UJT0 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TUBE1Q9UJT0 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TUBE1Q9UJT0 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TUBE1Q9UJT0 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC18.65■□□□□ 0.58
TUBE1Q9UJT0 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TUBE1Q9UJT0 AC092474.2-201ENST00000424288 719 ntBASIC18.65■□□□□ 0.58
TUBE1Q9UJT0 SPCS2P4-201ENST00000436160 681 ntBASIC18.65■□□□□ 0.58
TUBE1Q9UJT0 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC18.65■□□□□ 0.58
TUBE1Q9UJT0 SLBP-205ENST00000488267 987 ntTSL 2 BASIC18.65■□□□□ 0.58
TUBE1Q9UJT0 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TUBE1Q9UJT0 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
TUBE1Q9UJT0 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TUBE1Q9UJT0 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC18.65■□□□□ 0.58
TUBE1Q9UJT0 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC18.65■□□□□ 0.58
TUBE1Q9UJT0 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TUBE1Q9UJT0 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TUBE1Q9UJT0 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC18.65■□□□□ 0.58
TUBE1Q9UJT0 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC18.65■□□□□ 0.58
TUBE1Q9UJT0 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TUBE1Q9UJT0 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC18.65■□□□□ 0.58
TUBE1Q9UJT0 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
TUBE1Q9UJT0 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TUBE1Q9UJT0 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC18.65■□□□□ 0.58
TUBE1Q9UJT0 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TUBE1Q9UJT0 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
TUBE1Q9UJT0 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC18.65■□□□□ 0.58
TUBE1Q9UJT0 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TUBE1Q9UJT0 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC18.65■□□□□ 0.58
TUBE1Q9UJT0 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC18.64■□□□□ 0.58
TUBE1Q9UJT0 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
TUBE1Q9UJT0 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC18.64■□□□□ 0.58
TUBE1Q9UJT0 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
TUBE1Q9UJT0 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
TUBE1Q9UJT0 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TUBE1Q9UJT0 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TUBE1Q9UJT0 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC18.64■□□□□ 0.57
TUBE1Q9UJT0 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TUBE1Q9UJT0 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
TUBE1Q9UJT0 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC18.64■□□□□ 0.57
TUBE1Q9UJT0 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC18.64■□□□□ 0.57
TUBE1Q9UJT0 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TUBE1Q9UJT0 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TUBE1Q9UJT0 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TUBE1Q9UJT0 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TUBE1Q9UJT0 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC18.64■□□□□ 0.57
TUBE1Q9UJT0 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
TUBE1Q9UJT0 FAM58DP-201ENST00000428076 619 ntBASIC18.64■□□□□ 0.57
TUBE1Q9UJT0 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TUBE1Q9UJT0 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC18.64■□□□□ 0.57
TUBE1Q9UJT0 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC18.64■□□□□ 0.57
TUBE1Q9UJT0 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
TUBE1Q9UJT0 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
TUBE1Q9UJT0 MIR3197-201ENST00000582241 73 ntBASIC18.64■□□□□ 0.57
TUBE1Q9UJT0 AC015911.4-201ENST00000588022 1070 ntBASIC18.64■□□□□ 0.57
TUBE1Q9UJT0 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
TUBE1Q9UJT0 Z92544.3-201ENST00000624747 417 ntBASIC18.64■□□□□ 0.57
TUBE1Q9UJT0 AP001350.2-201ENST00000625104 1094 ntBASIC18.64■□□□□ 0.57
TUBE1Q9UJT0 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TUBE1Q9UJT0 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TUBE1Q9UJT0 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TUBE1Q9UJT0 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
TUBE1Q9UJT0 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC18.64■□□□□ 0.57
TUBE1Q9UJT0 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TUBE1Q9UJT0 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms