Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SPASTQ9UBP0 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.32■□□□□ 0.2
SPASTQ9UBP0 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
SPASTQ9UBP0 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
SPASTQ9UBP0 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SPASTQ9UBP0 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SPASTQ9UBP0 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
SPASTQ9UBP0 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SPASTQ9UBP0 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.32■□□□□ 0.2
SPASTQ9UBP0 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.32■□□□□ 0.2
SPASTQ9UBP0 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.32■□□□□ 0.2
SPASTQ9UBP0 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.32■□□□□ 0.2
SPASTQ9UBP0 AC105233.2-201ENST00000523697 349 ntBASIC16.32■□□□□ 0.2
SPASTQ9UBP0 AF228730.5-201ENST00000530288 346 ntBASIC16.32■□□□□ 0.2
SPASTQ9UBP0 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.32■□□□□ 0.2
SPASTQ9UBP0 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.32■□□□□ 0.2
SPASTQ9UBP0 MIR4745-201ENST00000577608 62 ntBASIC16.32■□□□□ 0.2
SPASTQ9UBP0 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SPASTQ9UBP0 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SPASTQ9UBP0 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.32■□□□□ 0.2
SPASTQ9UBP0 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SPASTQ9UBP0 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.32■□□□□ 0.2
SPASTQ9UBP0 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
SPASTQ9UBP0 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
SPASTQ9UBP0 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.32■□□□□ 0.2
SPASTQ9UBP0 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC16.32■□□□□ 0.2
SPASTQ9UBP0 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
SPASTQ9UBP0 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.32■□□□□ 0.2
SPASTQ9UBP0 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
SPASTQ9UBP0 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SPASTQ9UBP0 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SPASTQ9UBP0 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.31■□□□□ 0.2
SPASTQ9UBP0 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.31■□□□□ 0.2
SPASTQ9UBP0 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SPASTQ9UBP0 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SPASTQ9UBP0 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.31■□□□□ 0.2
SPASTQ9UBP0 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SPASTQ9UBP0 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.31■□□□□ 0.2
SPASTQ9UBP0 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SPASTQ9UBP0 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.31■□□□□ 0.2
SPASTQ9UBP0 LINC00895-201ENST00000629028 1637 ntBASIC16.31■□□□□ 0.2
SPASTQ9UBP0 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
SPASTQ9UBP0 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SPASTQ9UBP0 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.31■□□□□ 0.2
SPASTQ9UBP0 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SPASTQ9UBP0 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SPASTQ9UBP0 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SPASTQ9UBP0 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.31■□□□□ 0.2
SPASTQ9UBP0 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
SPASTQ9UBP0 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SPASTQ9UBP0 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.31■□□□□ 0.2
SPASTQ9UBP0 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
SPASTQ9UBP0 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.31■□□□□ 0.2
SPASTQ9UBP0 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SPASTQ9UBP0 IGHV3-42-201ENST00000520410 361 ntBASIC16.31■□□□□ 0.2
SPASTQ9UBP0 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.31■□□□□ 0.2
SPASTQ9UBP0 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.31■□□□□ 0.2
SPASTQ9UBP0 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.31■□□□□ 0.2
SPASTQ9UBP0 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.31■□□□□ 0.2
SPASTQ9UBP0 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC16.31■□□□□ 0.2
SPASTQ9UBP0 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.31■□□□□ 0.2
SPASTQ9UBP0 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SPASTQ9UBP0 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SPASTQ9UBP0 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SPASTQ9UBP0 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SPASTQ9UBP0 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.31■□□□□ 0.2
SPASTQ9UBP0 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SPASTQ9UBP0 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SPASTQ9UBP0 PCDHB19P-201ENST00000570871 2371 ntBASIC16.3■□□□□ 0.2
SPASTQ9UBP0 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
SPASTQ9UBP0 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SPASTQ9UBP0 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
SPASTQ9UBP0 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SPASTQ9UBP0 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SPASTQ9UBP0 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SPASTQ9UBP0 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
SPASTQ9UBP0 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SPASTQ9UBP0 AC046158.3-201ENST00000624947 2558 ntBASIC16.3■□□□□ 0.2
SPASTQ9UBP0 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SPASTQ9UBP0 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SPASTQ9UBP0 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SPASTQ9UBP0 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SPASTQ9UBP0 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SPASTQ9UBP0 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SPASTQ9UBP0 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.3■□□□□ 0.2
SPASTQ9UBP0 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.3■□□□□ 0.2
SPASTQ9UBP0 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.3■□□□□ 0.2
SPASTQ9UBP0 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SPASTQ9UBP0 AC069120.2-201ENST00000524091 540 ntBASIC16.3■□□□□ 0.2
SPASTQ9UBP0 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SPASTQ9UBP0 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.3■□□□□ 0.2
SPASTQ9UBP0 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.3■□□□□ 0.2
SPASTQ9UBP0 AL138918.1-201ENST00000568306 659 ntBASIC16.3■□□□□ 0.2
SPASTQ9UBP0 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SPASTQ9UBP0 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.3■□□□□ 0.2
SPASTQ9UBP0 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.3■□□□□ 0.2
SPASTQ9UBP0 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SPASTQ9UBP0 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.3■□□□□ 0.2
SPASTQ9UBP0 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SPASTQ9UBP0 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms