Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.49■□□□□ 0.07
NEUROD4Q9HD90 RNA5SP415-201ENST00000517246 115 ntBASIC15.49■□□□□ 0.07
NEUROD4Q9HD90 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC15.49■□□□□ 0.07
NEUROD4Q9HD90 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC15.49■□□□□ 0.07
NEUROD4Q9HD90 CD63-204ENST00000546939 779 ntTSL 3 BASIC15.49■□□□□ 0.07
NEUROD4Q9HD90 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NEUROD4Q9HD90 RPL18-209ENST00000550645 463 ntTSL 5 BASIC15.49■□□□□ 0.07
NEUROD4Q9HD90 RPL18-214ENST00000552588 559 ntTSL 3 BASIC15.49■□□□□ 0.07
NEUROD4Q9HD90 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.49■□□□□ 0.07
NEUROD4Q9HD90 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.49■□□□□ 0.07
NEUROD4Q9HD90 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.49■□□□□ 0.07
NEUROD4Q9HD90 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.49■□□□□ 0.07
NEUROD4Q9HD90 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NEUROD4Q9HD90 AL691403.2-201ENST00000618460 490 ntBASIC15.49■□□□□ 0.07
NEUROD4Q9HD90 AC010507.1-201ENST00000633895 436 ntBASIC15.49■□□□□ 0.07
NEUROD4Q9HD90 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NEUROD4Q9HD90 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
NEUROD4Q9HD90 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NEUROD4Q9HD90 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.49■□□□□ 0.07
NEUROD4Q9HD90 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NEUROD4Q9HD90 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NEUROD4Q9HD90 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15.49■□□□□ 0.07
NEUROD4Q9HD90 AC007950.2-201ENST00000615045 2347 ntBASIC15.49■□□□□ 0.07
NEUROD4Q9HD90 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
NEUROD4Q9HD90 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NEUROD4Q9HD90 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15.49■□□□□ 0.07
NEUROD4Q9HD90 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NEUROD4Q9HD90 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
NEUROD4Q9HD90 AC005622.1-201ENST00000636801 1703 ntBASIC15.48■□□□□ 0.07
NEUROD4Q9HD90 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.48■□□□□ 0.07
NEUROD4Q9HD90 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
NEUROD4Q9HD90 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
NEUROD4Q9HD90 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
NEUROD4Q9HD90 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NEUROD4Q9HD90 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NEUROD4Q9HD90 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.48■□□□□ 0.07
NEUROD4Q9HD90 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NEUROD4Q9HD90 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NEUROD4Q9HD90 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.48■□□□□ 0.07
NEUROD4Q9HD90 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
NEUROD4Q9HD90 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
NEUROD4Q9HD90 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.48■□□□□ 0.07
NEUROD4Q9HD90 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
NEUROD4Q9HD90 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NEUROD4Q9HD90 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NEUROD4Q9HD90 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC15.48■□□□□ 0.07
NEUROD4Q9HD90 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
NEUROD4Q9HD90 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
NEUROD4Q9HD90 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC15.48■□□□□ 0.07
NEUROD4Q9HD90 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
NEUROD4Q9HD90 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
NEUROD4Q9HD90 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC15.48■□□□□ 0.07
NEUROD4Q9HD90 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC15.48■□□□□ 0.07
NEUROD4Q9HD90 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.48■□□□□ 0.07
NEUROD4Q9HD90 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC15.48■□□□□ 0.07
NEUROD4Q9HD90 Z83851.2-201ENST00000609564 659 ntBASIC15.48■□□□□ 0.07
NEUROD4Q9HD90 AC007064.4-201ENST00000637740 555 ntBASIC15.48■□□□□ 0.07
NEUROD4Q9HD90 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
NEUROD4Q9HD90 AC008894.3-201ENST00000624324 3103 ntBASIC15.48■□□□□ 0.07
NEUROD4Q9HD90 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.48■□□□□ 0.07
NEUROD4Q9HD90 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NEUROD4Q9HD90 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.48■□□□□ 0.07
NEUROD4Q9HD90 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NEUROD4Q9HD90 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
NEUROD4Q9HD90 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.48■□□□□ 0.07
NEUROD4Q9HD90 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC15.48■□□□□ 0.07
NEUROD4Q9HD90 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NEUROD4Q9HD90 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
NEUROD4Q9HD90 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NEUROD4Q9HD90 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NEUROD4Q9HD90 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15.47■□□□□ 0.07
NEUROD4Q9HD90 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.47■□□□□ 0.07
NEUROD4Q9HD90 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.47■□□□□ 0.07
NEUROD4Q9HD90 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.47■□□□□ 0.07
NEUROD4Q9HD90 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
NEUROD4Q9HD90 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NEUROD4Q9HD90 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
NEUROD4Q9HD90 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.47■□□□□ 0.07
NEUROD4Q9HD90 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NEUROD4Q9HD90 AC008741.2-201ENST00000612792 3115 ntBASIC15.47■□□□□ 0.07
NEUROD4Q9HD90 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NEUROD4Q9HD90 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
NEUROD4Q9HD90 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.47■□□□□ 0.07
NEUROD4Q9HD90 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NEUROD4Q9HD90 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NEUROD4Q9HD90 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
NEUROD4Q9HD90 DDT-204ENST00000404092 805 ntTSL 3 BASIC15.47■□□□□ 0.07
NEUROD4Q9HD90 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
NEUROD4Q9HD90 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC15.47■□□□□ 0.07
NEUROD4Q9HD90 RHOQP3-201ENST00000437982 621 ntBASIC15.47■□□□□ 0.07
NEUROD4Q9HD90 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC15.47■□□□□ 0.07
NEUROD4Q9HD90 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
NEUROD4Q9HD90 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC15.47■□□□□ 0.07
NEUROD4Q9HD90 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
NEUROD4Q9HD90 AC023141.13-201ENST00000604991 943 ntBASIC15.47■□□□□ 0.07
NEUROD4Q9HD90 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.47■□□□□ 0.07
NEUROD4Q9HD90 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
NEUROD4Q9HD90 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.47■□□□□ 0.07
NEUROD4Q9HD90 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
NEUROD4Q9HD90 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms