Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
TM9SF3Q9HD45 CROCCP1-201ENST00000426910 5675 ntBASIC16.36■□□□□ 0.21
TM9SF3Q9HD45 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TM9SF3Q9HD45 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TM9SF3Q9HD45 FLJ38576-201ENST00000623820 2459 ntBASIC16.36■□□□□ 0.21
TM9SF3Q9HD45 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TM9SF3Q9HD45 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
TM9SF3Q9HD45 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.36■□□□□ 0.21
TM9SF3Q9HD45 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TM9SF3Q9HD45 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TM9SF3Q9HD45 FAM220BP-201ENST00000377689 816 ntBASIC16.36■□□□□ 0.21
TM9SF3Q9HD45 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.36■□□□□ 0.21
TM9SF3Q9HD45 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TM9SF3Q9HD45 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TM9SF3Q9HD45 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TM9SF3Q9HD45 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
TM9SF3Q9HD45 AC124947.2-201ENST00000547118 1133 ntBASIC16.36■□□□□ 0.21
TM9SF3Q9HD45 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.36■□□□□ 0.21
TM9SF3Q9HD45 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TM9SF3Q9HD45 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TM9SF3Q9HD45 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
TM9SF3Q9HD45 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.36■□□□□ 0.21
TM9SF3Q9HD45 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TM9SF3Q9HD45 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
TM9SF3Q9HD45 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TM9SF3Q9HD45 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
TM9SF3Q9HD45 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TM9SF3Q9HD45 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TM9SF3Q9HD45 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TM9SF3Q9HD45 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.36■□□□□ 0.21
TM9SF3Q9HD45 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
TM9SF3Q9HD45 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TM9SF3Q9HD45 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TM9SF3Q9HD45 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
TM9SF3Q9HD45 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
TM9SF3Q9HD45 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TM9SF3Q9HD45 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.35■□□□□ 0.21
TM9SF3Q9HD45 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TM9SF3Q9HD45 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TM9SF3Q9HD45 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
TM9SF3Q9HD45 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.35■□□□□ 0.21
TM9SF3Q9HD45 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TM9SF3Q9HD45 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TM9SF3Q9HD45 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TM9SF3Q9HD45 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
TM9SF3Q9HD45 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TM9SF3Q9HD45 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TM9SF3Q9HD45 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TM9SF3Q9HD45 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.35■□□□□ 0.21
TM9SF3Q9HD45 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.35■□□□□ 0.21
TM9SF3Q9HD45 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TM9SF3Q9HD45 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TM9SF3Q9HD45 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.35■□□□□ 0.21
TM9SF3Q9HD45 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC16.35■□□□□ 0.21
TM9SF3Q9HD45 MTND6P24-201ENST00000440466 518 ntBASIC16.35■□□□□ 0.21
TM9SF3Q9HD45 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TM9SF3Q9HD45 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC16.35■□□□□ 0.21
TM9SF3Q9HD45 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC16.35■□□□□ 0.21
TM9SF3Q9HD45 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC16.35■□□□□ 0.21
TM9SF3Q9HD45 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
TM9SF3Q9HD45 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.35■□□□□ 0.21
TM9SF3Q9HD45 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.35■□□□□ 0.21
TM9SF3Q9HD45 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC16.35■□□□□ 0.21
TM9SF3Q9HD45 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC16.35■□□□□ 0.21
TM9SF3Q9HD45 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TM9SF3Q9HD45 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TM9SF3Q9HD45 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TM9SF3Q9HD45 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TM9SF3Q9HD45 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
TM9SF3Q9HD45 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TM9SF3Q9HD45 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TM9SF3Q9HD45 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
TM9SF3Q9HD45 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TM9SF3Q9HD45 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TM9SF3Q9HD45 AL513477.1-201ENST00000602865 2407 ntBASIC16.35■□□□□ 0.21
TM9SF3Q9HD45 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.35■□□□□ 0.21
TM9SF3Q9HD45 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.35■□□□□ 0.21
TM9SF3Q9HD45 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TM9SF3Q9HD45 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TM9SF3Q9HD45 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TM9SF3Q9HD45 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TM9SF3Q9HD45 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.34■□□□□ 0.21
TM9SF3Q9HD45 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TM9SF3Q9HD45 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
TM9SF3Q9HD45 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.34■□□□□ 0.21
TM9SF3Q9HD45 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.34■□□□□ 0.21
TM9SF3Q9HD45 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
TM9SF3Q9HD45 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TM9SF3Q9HD45 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TM9SF3Q9HD45 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TM9SF3Q9HD45 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
TM9SF3Q9HD45 AL671710.1-201ENST00000610245 2349 ntBASIC16.34■□□□□ 0.21
TM9SF3Q9HD45 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
TM9SF3Q9HD45 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TM9SF3Q9HD45 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TM9SF3Q9HD45 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TM9SF3Q9HD45 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
TM9SF3Q9HD45 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TM9SF3Q9HD45 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.34■□□□□ 0.21
TM9SF3Q9HD45 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms