Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC14.91□□□□□ -0.02
CHD8Q9HCK8 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHD8Q9HCK8 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
CHD8Q9HCK8 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CHD8Q9HCK8 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CHD8Q9HCK8 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC14.91□□□□□ -0.02
CHD8Q9HCK8 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CHD8Q9HCK8 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHD8Q9HCK8 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHD8Q9HCK8 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHD8Q9HCK8 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CHD8Q9HCK8 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHD8Q9HCK8 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CHD8Q9HCK8 CMC1-204ENST00000423894 549 ntTSL 2 BASIC14.9□□□□□ -0.02
CHD8Q9HCK8 EHMT2-AS1-201ENST00000434689 373 ntTSL 3 BASIC14.9□□□□□ -0.02
CHD8Q9HCK8 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC14.9□□□□□ -0.02
CHD8Q9HCK8 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC14.9□□□□□ -0.02
CHD8Q9HCK8 KSR1-207ENST00000578981 748 ntTSL 4 BASIC14.9□□□□□ -0.02
CHD8Q9HCK8 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CHD8Q9HCK8 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC14.9□□□□□ -0.02
CHD8Q9HCK8 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC14.9□□□□□ -0.02
CHD8Q9HCK8 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHD8Q9HCK8 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.9□□□□□ -0.02
CHD8Q9HCK8 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.9□□□□□ -0.02
CHD8Q9HCK8 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.9□□□□□ -0.02
CHD8Q9HCK8 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC14.9□□□□□ -0.02
CHD8Q9HCK8 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHD8Q9HCK8 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC14.9□□□□□ -0.02
CHD8Q9HCK8 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
CHD8Q9HCK8 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
CHD8Q9HCK8 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CHD8Q9HCK8 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHD8Q9HCK8 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHD8Q9HCK8 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHD8Q9HCK8 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHD8Q9HCK8 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC14.9□□□□□ -0.02
CHD8Q9HCK8 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CHD8Q9HCK8 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC14.9□□□□□ -0.02
CHD8Q9HCK8 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CHD8Q9HCK8 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC14.9□□□□□ -0.02
CHD8Q9HCK8 AC005730.2-201ENST00000564549 1184 ntBASIC14.9□□□□□ -0.02
CHD8Q9HCK8 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC14.9□□□□□ -0.02
CHD8Q9HCK8 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC14.9□□□□□ -0.02
CHD8Q9HCK8 AC091544.8-201ENST00000619490 361 ntBASIC14.9□□□□□ -0.02
CHD8Q9HCK8 AC233280.19-201ENST00000633223 136 ntBASIC14.9□□□□□ -0.02
CHD8Q9HCK8 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC14.9□□□□□ -0.02
CHD8Q9HCK8 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHD8Q9HCK8 AC104581.1-202ENST00000635932 2618 ntBASIC14.9□□□□□ -0.02
CHD8Q9HCK8 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
CHD8Q9HCK8 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHD8Q9HCK8 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC14.9□□□□□ -0.02
CHD8Q9HCK8 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC14.9□□□□□ -0.02
CHD8Q9HCK8 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC14.9□□□□□ -0.02
CHD8Q9HCK8 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CHD8Q9HCK8 AC025271.4-201ENST00000621477 1726 ntBASIC14.9□□□□□ -0.02
CHD8Q9HCK8 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CHD8Q9HCK8 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CHD8Q9HCK8 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CHD8Q9HCK8 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHD8Q9HCK8 ACKR1-201ENST00000368121 1240 ntBASIC14.89□□□□□ -0.03
CHD8Q9HCK8 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
CHD8Q9HCK8 FO393414.2-201ENST00000405153 598 ntBASIC14.89□□□□□ -0.03
CHD8Q9HCK8 ACTG1P2-201ENST00000415776 1125 ntBASIC14.89□□□□□ -0.03
CHD8Q9HCK8 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.89□□□□□ -0.03
CHD8Q9HCK8 ACTG1P11-201ENST00000425411 1125 ntBASIC14.89□□□□□ -0.03
CHD8Q9HCK8 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC14.89□□□□□ -0.03
CHD8Q9HCK8 TARDBPP1-201ENST00000442013 1203 ntBASIC14.89□□□□□ -0.03
CHD8Q9HCK8 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC14.89□□□□□ -0.03
CHD8Q9HCK8 NOC2LP1-201ENST00000450578 752 ntBASIC14.89□□□□□ -0.03
CHD8Q9HCK8 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
CHD8Q9HCK8 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC14.89□□□□□ -0.03
CHD8Q9HCK8 AL161670.2-201ENST00000557650 1227 ntBASIC14.89□□□□□ -0.03
CHD8Q9HCK8 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC14.89□□□□□ -0.03
CHD8Q9HCK8 DNM1P30-201ENST00000563586 452 ntBASIC14.89□□□□□ -0.03
CHD8Q9HCK8 AL118516.1-201ENST00000564152 670 ntBASIC14.89□□□□□ -0.03
CHD8Q9HCK8 ETV2-207ENST00000619399 994 ntTSL 5 BASIC14.89□□□□□ -0.03
CHD8Q9HCK8 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC14.89□□□□□ -0.03
CHD8Q9HCK8 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHD8Q9HCK8 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHD8Q9HCK8 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHD8Q9HCK8 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHD8Q9HCK8 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CHD8Q9HCK8 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CHD8Q9HCK8 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHD8Q9HCK8 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHD8Q9HCK8 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHD8Q9HCK8 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC14.89□□□□□ -0.03
CHD8Q9HCK8 PHF5A-201ENST00000216252 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHD8Q9HCK8 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC14.89□□□□□ -0.03
CHD8Q9HCK8 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHD8Q9HCK8 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CHD8Q9HCK8 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
CHD8Q9HCK8 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHD8Q9HCK8 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHD8Q9HCK8 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CHD8Q9HCK8 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC14.89□□□□□ -0.03
CHD8Q9HCK8 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHD8Q9HCK8 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CHD8Q9HCK8 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CHD8Q9HCK8 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms