Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
HIPK3Q9H422 AC018665.1-201ENST00000622927 1362 ntBASIC17.77■□□□□ 0.43
HIPK3Q9H422 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
HIPK3Q9H422 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
HIPK3Q9H422 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
HIPK3Q9H422 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.76■□□□□ 0.43
HIPK3Q9H422 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HIPK3Q9H422 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HIPK3Q9H422 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
HIPK3Q9H422 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
HIPK3Q9H422 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HIPK3Q9H422 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.76■□□□□ 0.43
HIPK3Q9H422 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HIPK3Q9H422 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC17.76■□□□□ 0.43
HIPK3Q9H422 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
HIPK3Q9H422 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
HIPK3Q9H422 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
HIPK3Q9H422 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
HIPK3Q9H422 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
HIPK3Q9H422 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
HIPK3Q9H422 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC17.76■□□□□ 0.43
HIPK3Q9H422 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
HIPK3Q9H422 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
HIPK3Q9H422 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.76■□□□□ 0.43
HIPK3Q9H422 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC17.76■□□□□ 0.43
HIPK3Q9H422 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC17.76■□□□□ 0.43
HIPK3Q9H422 RN7SL219P-201ENST00000582872 296 ntBASIC17.76■□□□□ 0.43
HIPK3Q9H422 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC17.76■□□□□ 0.43
HIPK3Q9H422 AC233724.13-201ENST00000598383 410 ntBASIC17.76■□□□□ 0.43
HIPK3Q9H422 WNT11-204ENST00000621122 789 ntTSL 5 BASIC17.76■□□□□ 0.43
HIPK3Q9H422 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
HIPK3Q9H422 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
HIPK3Q9H422 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HIPK3Q9H422 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HIPK3Q9H422 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.76■□□□□ 0.43
HIPK3Q9H422 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
HIPK3Q9H422 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
HIPK3Q9H422 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HIPK3Q9H422 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.76■□□□□ 0.43
HIPK3Q9H422 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HIPK3Q9H422 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
HIPK3Q9H422 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
HIPK3Q9H422 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.75■□□□□ 0.43
HIPK3Q9H422 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
HIPK3Q9H422 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HIPK3Q9H422 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.75■□□□□ 0.43
HIPK3Q9H422 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
HIPK3Q9H422 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HIPK3Q9H422 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
HIPK3Q9H422 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
HIPK3Q9H422 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
HIPK3Q9H422 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HIPK3Q9H422 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HIPK3Q9H422 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
HIPK3Q9H422 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.75■□□□□ 0.43
HIPK3Q9H422 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HIPK3Q9H422 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HIPK3Q9H422 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
HIPK3Q9H422 STX1A-203ENST00000395155 783 ntTSL 2 BASIC17.75■□□□□ 0.43
HIPK3Q9H422 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HIPK3Q9H422 FO393414.2-201ENST00000405153 598 ntBASIC17.75■□□□□ 0.43
HIPK3Q9H422 NME6-203ENST00000415644 849 ntTSL 2 BASIC17.75■□□□□ 0.43
HIPK3Q9H422 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
HIPK3Q9H422 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC17.75■□□□□ 0.43
HIPK3Q9H422 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC17.75■□□□□ 0.43
HIPK3Q9H422 AP002490.2-201ENST00000524791 560 ntBASIC17.75■□□□□ 0.43
HIPK3Q9H422 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
HIPK3Q9H422 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HIPK3Q9H422 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.75■□□□□ 0.43
HIPK3Q9H422 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC17.75■□□□□ 0.43
HIPK3Q9H422 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
HIPK3Q9H422 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.75■□□□□ 0.43
HIPK3Q9H422 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC17.75■□□□□ 0.43
HIPK3Q9H422 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HIPK3Q9H422 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.75■□□□□ 0.43
HIPK3Q9H422 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC17.74■□□□□ 0.43
HIPK3Q9H422 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.74■□□□□ 0.43
HIPK3Q9H422 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.74■□□□□ 0.43
HIPK3Q9H422 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
HIPK3Q9H422 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HIPK3Q9H422 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HIPK3Q9H422 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
HIPK3Q9H422 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HIPK3Q9H422 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HIPK3Q9H422 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC17.74■□□□□ 0.43
HIPK3Q9H422 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC17.74■□□□□ 0.43
HIPK3Q9H422 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HIPK3Q9H422 CTBP2P5-201ENST00000454986 1264 ntBASIC17.74■□□□□ 0.43
HIPK3Q9H422 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC17.74■□□□□ 0.43
HIPK3Q9H422 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC17.74■□□□□ 0.43
HIPK3Q9H422 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC17.74■□□□□ 0.43
HIPK3Q9H422 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC17.74■□□□□ 0.43
HIPK3Q9H422 RPSAP52-203ENST00000622976 1023 ntBASIC17.74■□□□□ 0.43
HIPK3Q9H422 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC17.74■□□□□ 0.43
HIPK3Q9H422 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HIPK3Q9H422 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HIPK3Q9H422 AL031731.1-201ENST00000642131 2094 ntBASIC17.74■□□□□ 0.43
HIPK3Q9H422 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HIPK3Q9H422 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC17.74■□□□□ 0.43
HIPK3Q9H422 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms