Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.48■□□□□ 0.23
TRIM4Q9C037 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.48■□□□□ 0.23
TRIM4Q9C037 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.48■□□□□ 0.23
TRIM4Q9C037 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM4Q9C037 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.48■□□□□ 0.23
TRIM4Q9C037 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.48■□□□□ 0.23
TRIM4Q9C037 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16.48■□□□□ 0.23
TRIM4Q9C037 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.48■□□□□ 0.23
TRIM4Q9C037 MIR4469-201ENST00000583919 79 ntBASIC16.48■□□□□ 0.23
TRIM4Q9C037 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.48■□□□□ 0.23
TRIM4Q9C037 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.48■□□□□ 0.23
TRIM4Q9C037 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.48■□□□□ 0.23
TRIM4Q9C037 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
TRIM4Q9C037 POLL-206ENST00000370172 2308 ntTSL 2 BASIC16.48■□□□□ 0.23
TRIM4Q9C037 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM4Q9C037 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.48■□□□□ 0.23
TRIM4Q9C037 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC16.48■□□□□ 0.23
TRIM4Q9C037 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM4Q9C037 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM4Q9C037 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM4Q9C037 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM4Q9C037 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC16.48■□□□□ 0.23
TRIM4Q9C037 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.48■□□□□ 0.23
TRIM4Q9C037 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM4Q9C037 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM4Q9C037 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.48■□□□□ 0.23
TRIM4Q9C037 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM4Q9C037 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
TRIM4Q9C037 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM4Q9C037 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM4Q9C037 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
TRIM4Q9C037 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC16.47■□□□□ 0.23
TRIM4Q9C037 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM4Q9C037 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM4Q9C037 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM4Q9C037 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
TRIM4Q9C037 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
TRIM4Q9C037 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.47■□□□□ 0.23
TRIM4Q9C037 SBF1P1-201ENST00000444527 5631 ntBASIC16.47■□□□□ 0.23
TRIM4Q9C037 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM4Q9C037 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM4Q9C037 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM4Q9C037 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
TRIM4Q9C037 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.47■□□□□ 0.23
TRIM4Q9C037 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.47■□□□□ 0.23
TRIM4Q9C037 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM4Q9C037 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC16.47■□□□□ 0.23
TRIM4Q9C037 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM4Q9C037 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC16.47■□□□□ 0.23
TRIM4Q9C037 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM4Q9C037 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.47■□□□□ 0.23
TRIM4Q9C037 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM4Q9C037 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM4Q9C037 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM4Q9C037 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM4Q9C037 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM4Q9C037 PNKD-204ENST00000436005 978 ntTSL 5 BASIC16.47■□□□□ 0.23
TRIM4Q9C037 ALG1L5P-201ENST00000482043 771 ntBASIC16.47■□□□□ 0.23
TRIM4Q9C037 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.47■□□□□ 0.23
TRIM4Q9C037 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
TRIM4Q9C037 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.47■□□□□ 0.23
TRIM4Q9C037 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.47■□□□□ 0.23
TRIM4Q9C037 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.47■□□□□ 0.23
TRIM4Q9C037 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.47■□□□□ 0.23
TRIM4Q9C037 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
TRIM4Q9C037 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.47■□□□□ 0.23
TRIM4Q9C037 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM4Q9C037 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM4Q9C037 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM4Q9C037 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
TRIM4Q9C037 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM4Q9C037 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.47■□□□□ 0.23
TRIM4Q9C037 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.47■□□□□ 0.23
TRIM4Q9C037 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC16.47■□□□□ 0.23
TRIM4Q9C037 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.47■□□□□ 0.23
TRIM4Q9C037 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM4Q9C037 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM4Q9C037 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.47■□□□□ 0.23
TRIM4Q9C037 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM4Q9C037 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.47■□□□□ 0.23
TRIM4Q9C037 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM4Q9C037 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
TRIM4Q9C037 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM4Q9C037 AL049757.1-201ENST00000616842 1596 ntBASIC16.47■□□□□ 0.23
TRIM4Q9C037 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC16.46■□□□□ 0.23
TRIM4Q9C037 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.46■□□□□ 0.23
TRIM4Q9C037 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM4Q9C037 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.46■□□□□ 0.23
TRIM4Q9C037 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.46■□□□□ 0.23
TRIM4Q9C037 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM4Q9C037 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.46■□□□□ 0.23
TRIM4Q9C037 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM4Q9C037 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM4Q9C037 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM4Q9C037 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.46■□□□□ 0.23
TRIM4Q9C037 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM4Q9C037 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
TRIM4Q9C037 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.46■□□□□ 0.23
TRIM4Q9C037 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
TRIM4Q9C037 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms