Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.46■□□□□ 0.07
YIPF4Q9BSR8 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC15.46■□□□□ 0.07
YIPF4Q9BSR8 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
YIPF4Q9BSR8 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
YIPF4Q9BSR8 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC15.46■□□□□ 0.07
YIPF4Q9BSR8 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15.46■□□□□ 0.07
YIPF4Q9BSR8 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
YIPF4Q9BSR8 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
YIPF4Q9BSR8 AL596087.1-201ENST00000400979 1969 ntBASIC15.46■□□□□ 0.07
YIPF4Q9BSR8 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.46■□□□□ 0.07
YIPF4Q9BSR8 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
YIPF4Q9BSR8 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
YIPF4Q9BSR8 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
YIPF4Q9BSR8 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
YIPF4Q9BSR8 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.46■□□□□ 0.07
YIPF4Q9BSR8 DPM2-202ENST00000373110 738 ntTSL 2 BASIC15.46■□□□□ 0.07
YIPF4Q9BSR8 RNU1-129P-201ENST00000384064 167 ntBASIC15.46■□□□□ 0.07
YIPF4Q9BSR8 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
YIPF4Q9BSR8 DDT-204ENST00000404092 805 ntTSL 3 BASIC15.46■□□□□ 0.07
YIPF4Q9BSR8 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
YIPF4Q9BSR8 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
YIPF4Q9BSR8 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15.46■□□□□ 0.07
YIPF4Q9BSR8 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC15.46■□□□□ 0.07
YIPF4Q9BSR8 AC034105.1-201ENST00000563488 319 ntBASIC15.46■□□□□ 0.07
YIPF4Q9BSR8 AL031432.2-201ENST00000566714 459 ntBASIC15.46■□□□□ 0.07
YIPF4Q9BSR8 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.46■□□□□ 0.07
YIPF4Q9BSR8 AL928711.1-201ENST00000570165 459 ntBASIC15.46■□□□□ 0.07
YIPF4Q9BSR8 MIR3687-2-201ENST00000577708 61 ntBASIC15.46■□□□□ 0.07
YIPF4Q9BSR8 U1.21-201ENST00000580816 167 ntBASIC15.46■□□□□ 0.07
YIPF4Q9BSR8 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC15.46■□□□□ 0.07
YIPF4Q9BSR8 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC15.46■□□□□ 0.07
YIPF4Q9BSR8 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15.46■□□□□ 0.07
YIPF4Q9BSR8 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.46■□□□□ 0.07
YIPF4Q9BSR8 AL031055.1-201ENST00000606362 631 ntBASIC15.46■□□□□ 0.07
YIPF4Q9BSR8 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC15.46■□□□□ 0.07
YIPF4Q9BSR8 MIR3687-1-201ENST00000614492 61 ntBASIC15.46■□□□□ 0.07
YIPF4Q9BSR8 AL691403.2-201ENST00000618460 490 ntBASIC15.46■□□□□ 0.07
YIPF4Q9BSR8 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
YIPF4Q9BSR8 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
YIPF4Q9BSR8 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
YIPF4Q9BSR8 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
YIPF4Q9BSR8 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
YIPF4Q9BSR8 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
YIPF4Q9BSR8 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
YIPF4Q9BSR8 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.06
YIPF4Q9BSR8 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
YIPF4Q9BSR8 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
YIPF4Q9BSR8 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
YIPF4Q9BSR8 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.06
YIPF4Q9BSR8 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
YIPF4Q9BSR8 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
YIPF4Q9BSR8 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
YIPF4Q9BSR8 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
YIPF4Q9BSR8 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
YIPF4Q9BSR8 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.45■□□□□ 0.06
YIPF4Q9BSR8 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
YIPF4Q9BSR8 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
YIPF4Q9BSR8 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.45■□□□□ 0.06
YIPF4Q9BSR8 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
YIPF4Q9BSR8 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
YIPF4Q9BSR8 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
YIPF4Q9BSR8 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.45■□□□□ 0.06
YIPF4Q9BSR8 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
YIPF4Q9BSR8 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
YIPF4Q9BSR8 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
YIPF4Q9BSR8 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
YIPF4Q9BSR8 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
YIPF4Q9BSR8 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.45■□□□□ 0.06
YIPF4Q9BSR8 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
YIPF4Q9BSR8 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
YIPF4Q9BSR8 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.45■□□□□ 0.06
YIPF4Q9BSR8 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
YIPF4Q9BSR8 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
YIPF4Q9BSR8 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
YIPF4Q9BSR8 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.45■□□□□ 0.06
YIPF4Q9BSR8 KRT18P3-201ENST00000451602 1288 ntBASIC15.45■□□□□ 0.06
YIPF4Q9BSR8 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15.45■□□□□ 0.06
YIPF4Q9BSR8 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.45■□□□□ 0.06
YIPF4Q9BSR8 AC096734.2-201ENST00000562054 433 ntBASIC15.45■□□□□ 0.06
YIPF4Q9BSR8 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC15.45■□□□□ 0.06
YIPF4Q9BSR8 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC15.45■□□□□ 0.06
YIPF4Q9BSR8 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.45■□□□□ 0.06
YIPF4Q9BSR8 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
YIPF4Q9BSR8 AC064836.3-201ENST00000607928 673 ntBASIC15.45■□□□□ 0.06
YIPF4Q9BSR8 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
YIPF4Q9BSR8 AL645728.2-201ENST00000641974 660 ntBASIC15.45■□□□□ 0.06
YIPF4Q9BSR8 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
YIPF4Q9BSR8 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
YIPF4Q9BSR8 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
YIPF4Q9BSR8 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
YIPF4Q9BSR8 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
YIPF4Q9BSR8 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.45■□□□□ 0.06
YIPF4Q9BSR8 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
YIPF4Q9BSR8 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
YIPF4Q9BSR8 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
YIPF4Q9BSR8 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
YIPF4Q9BSR8 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
YIPF4Q9BSR8 LINC01144-201ENST00000626198 1710 ntBASIC15.45■□□□□ 0.06
YIPF4Q9BSR8 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
YIPF4Q9BSR8 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms