Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RAB40CQ96S21 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RAB40CQ96S21 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
RAB40CQ96S21 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RAB40CQ96S21 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
RAB40CQ96S21 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
RAB40CQ96S21 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
RAB40CQ96S21 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RAB40CQ96S21 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
RAB40CQ96S21 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RAB40CQ96S21 ARMC10P1-201ENST00000313754 855 ntBASIC13.33□□□□□ -0.28
RAB40CQ96S21 SOD2-201ENST00000337404 991 ntTSL 2 BASIC13.33□□□□□ -0.28
RAB40CQ96S21 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
RAB40CQ96S21 MIR1224-201ENST00000408193 85 ntBASIC13.33□□□□□ -0.28
RAB40CQ96S21 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC13.33□□□□□ -0.28
RAB40CQ96S21 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC13.33□□□□□ -0.28
RAB40CQ96S21 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
RAB40CQ96S21 AL353135.1-201ENST00000606729 504 ntBASIC13.33□□□□□ -0.28
RAB40CQ96S21 AC010331.1-201ENST00000611423 582 ntBASIC13.33□□□□□ -0.28
RAB40CQ96S21 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
RAB40CQ96S21 AC073592.4-201ENST00000623827 446 ntBASIC13.33□□□□□ -0.28
RAB40CQ96S21 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
RAB40CQ96S21 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RAB40CQ96S21 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
RAB40CQ96S21 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RAB40CQ96S21 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC13.33□□□□□ -0.28
RAB40CQ96S21 AC005332.1-201ENST00000577698 1310 ntBASIC13.33□□□□□ -0.28
RAB40CQ96S21 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RAB40CQ96S21 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
RAB40CQ96S21 TMBIM7P-203ENST00000641617 1718 ntBASIC13.33□□□□□ -0.28
RAB40CQ96S21 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
RAB40CQ96S21 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RAB40CQ96S21 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RAB40CQ96S21 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
RAB40CQ96S21 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
RAB40CQ96S21 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB40CQ96S21 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC13.32□□□□□ -0.28
RAB40CQ96S21 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
RAB40CQ96S21 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC13.32□□□□□ -0.28
RAB40CQ96S21 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC13.32□□□□□ -0.28
RAB40CQ96S21 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC13.32□□□□□ -0.28
RAB40CQ96S21 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RAB40CQ96S21 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC13.32□□□□□ -0.28
RAB40CQ96S21 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC13.32□□□□□ -0.28
RAB40CQ96S21 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB40CQ96S21 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RAB40CQ96S21 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB40CQ96S21 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RAB40CQ96S21 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC13.32□□□□□ -0.28
RAB40CQ96S21 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB40CQ96S21 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB40CQ96S21 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RAB40CQ96S21 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB40CQ96S21 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB40CQ96S21 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RAB40CQ96S21 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC13.32□□□□□ -0.28
RAB40CQ96S21 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB40CQ96S21 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB40CQ96S21 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB40CQ96S21 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
RAB40CQ96S21 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB40CQ96S21 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB40CQ96S21 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB40CQ96S21 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB40CQ96S21 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB40CQ96S21 FXN-203ENST00000396366 922 ntTSL 2 BASIC13.32□□□□□ -0.28
RAB40CQ96S21 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RAB40CQ96S21 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC13.32□□□□□ -0.28
RAB40CQ96S21 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RAB40CQ96S21 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC13.32□□□□□ -0.28
RAB40CQ96S21 KRT18P35-201ENST00000510488 1269 ntBASIC13.32□□□□□ -0.28
RAB40CQ96S21 PTK2-216ENST00000519881 863 ntTSL 3 BASIC13.32□□□□□ -0.28
RAB40CQ96S21 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC13.32□□□□□ -0.28
RAB40CQ96S21 AC131009.4-201ENST00000624048 1740 ntBASIC13.32□□□□□ -0.28
RAB40CQ96S21 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC13.32□□□□□ -0.28
RAB40CQ96S21 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RAB40CQ96S21 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB40CQ96S21 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
RAB40CQ96S21 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB40CQ96S21 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RAB40CQ96S21 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
RAB40CQ96S21 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB40CQ96S21 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB40CQ96S21 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RAB40CQ96S21 SSR4P1-203ENST00000599569 2260 ntBASIC13.32□□□□□ -0.28
RAB40CQ96S21 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RAB40CQ96S21 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB40CQ96S21 LINC02228-204ENST00000642115 2962 ntBASIC13.32□□□□□ -0.28
RAB40CQ96S21 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB40CQ96S21 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAB40CQ96S21 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC13.32□□□□□ -0.28
RAB40CQ96S21 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB40CQ96S21 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
RAB40CQ96S21 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB40CQ96S21 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
RAB40CQ96S21 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB40CQ96S21 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
RAB40CQ96S21 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC13.31□□□□□ -0.28
RAB40CQ96S21 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB40CQ96S21 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms