Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC85AQ96PX6 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC85AQ96PX6 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
CCDC85AQ96PX6 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC85AQ96PX6 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC20.24■□□□□ 0.83
CCDC85AQ96PX6 RN7SL692P-201ENST00000464677 288 ntBASIC20.24■□□□□ 0.83
CCDC85AQ96PX6 HLA-J-202ENST00000469281 1241 ntBASIC20.24■□□□□ 0.83
CCDC85AQ96PX6 RN7SL618P-201ENST00000477850 296 ntBASIC20.24■□□□□ 0.83
CCDC85AQ96PX6 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC20.24■□□□□ 0.83
CCDC85AQ96PX6 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC20.24■□□□□ 0.83
CCDC85AQ96PX6 SRP9-204ENST00000619790 377 ntTSL 2 BASIC20.24■□□□□ 0.83
CCDC85AQ96PX6 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC20.24■□□□□ 0.83
CCDC85AQ96PX6 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC85AQ96PX6 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC85AQ96PX6 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC20.24■□□□□ 0.83
CCDC85AQ96PX6 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC85AQ96PX6 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
CCDC85AQ96PX6 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC85AQ96PX6 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CCDC85AQ96PX6 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC85AQ96PX6 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC85AQ96PX6 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC85AQ96PX6 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC85AQ96PX6 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC85AQ96PX6 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
CCDC85AQ96PX6 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
CCDC85AQ96PX6 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC85AQ96PX6 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC85AQ96PX6 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC20.23■□□□□ 0.83
CCDC85AQ96PX6 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC85AQ96PX6 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC20.23■□□□□ 0.83
CCDC85AQ96PX6 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC85AQ96PX6 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
CCDC85AQ96PX6 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC85AQ96PX6 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC85AQ96PX6 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC85AQ96PX6 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC85AQ96PX6 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC85AQ96PX6 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC20.23■□□□□ 0.83
CCDC85AQ96PX6 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC85AQ96PX6 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC85AQ96PX6 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC85AQ96PX6 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CCDC85AQ96PX6 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC20.23■□□□□ 0.83
CCDC85AQ96PX6 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CCDC85AQ96PX6 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC20.23■□□□□ 0.83
CCDC85AQ96PX6 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC20.23■□□□□ 0.83
CCDC85AQ96PX6 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC20.23■□□□□ 0.83
CCDC85AQ96PX6 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC85AQ96PX6 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC20.23■□□□□ 0.83
CCDC85AQ96PX6 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
CCDC85AQ96PX6 FLJ38576-201ENST00000623820 2459 ntBASIC20.23■□□□□ 0.83
CCDC85AQ96PX6 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC85AQ96PX6 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC20.23■□□□□ 0.83
CCDC85AQ96PX6 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC20.23■□□□□ 0.83
CCDC85AQ96PX6 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
CCDC85AQ96PX6 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC20.22■□□□□ 0.83
CCDC85AQ96PX6 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CCDC85AQ96PX6 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC85AQ96PX6 AC009053.2-201ENST00000563701 2365 ntBASIC20.22■□□□□ 0.83
CCDC85AQ96PX6 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC85AQ96PX6 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC85AQ96PX6 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC85AQ96PX6 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC20.22■□□□□ 0.83
CCDC85AQ96PX6 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CCDC85AQ96PX6 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC85AQ96PX6 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC85AQ96PX6 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC85AQ96PX6 GAPDHP21-201ENST00000450301 1010 ntBASIC20.22■□□□□ 0.83
CCDC85AQ96PX6 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC85AQ96PX6 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC20.22■□□□□ 0.83
CCDC85AQ96PX6 RAB35-202ENST00000534951 939 ntTSL 2 BASIC20.22■□□□□ 0.83
CCDC85AQ96PX6 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC20.22■□□□□ 0.83
CCDC85AQ96PX6 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC85AQ96PX6 AL596325.1-201ENST00000563991 1082 ntBASIC20.22■□□□□ 0.83
CCDC85AQ96PX6 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC20.22■□□□□ 0.83
CCDC85AQ96PX6 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC85AQ96PX6 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC20.22■□□□□ 0.83
CCDC85AQ96PX6 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CCDC85AQ96PX6 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC20.22■□□□□ 0.83
CCDC85AQ96PX6 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC85AQ96PX6 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CCDC85AQ96PX6 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC85AQ96PX6 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CCDC85AQ96PX6 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC85AQ96PX6 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC85AQ96PX6 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
CCDC85AQ96PX6 U82695.1-201ENST00000635752 1889 ntBASIC20.22■□□□□ 0.83
CCDC85AQ96PX6 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC85AQ96PX6 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC20.22■□□□□ 0.83
CCDC85AQ96PX6 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC85AQ96PX6 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC85AQ96PX6 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC20.21■□□□□ 0.83
CCDC85AQ96PX6 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CCDC85AQ96PX6 AC026471.1-201ENST00000564629 3026 ntBASIC20.21■□□□□ 0.83
CCDC85AQ96PX6 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC20.21■□□□□ 0.83
CCDC85AQ96PX6 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC85AQ96PX6 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC85AQ96PX6 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CCDC85AQ96PX6 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms