Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.86■□□□□ 0.29
RPRD1AQ96P16 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RPRD1AQ96P16 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
RPRD1AQ96P16 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
RPRD1AQ96P16 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.85■□□□□ 0.29
RPRD1AQ96P16 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.85■□□□□ 0.29
RPRD1AQ96P16 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RPRD1AQ96P16 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
RPRD1AQ96P16 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
RPRD1AQ96P16 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
RPRD1AQ96P16 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RPRD1AQ96P16 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RPRD1AQ96P16 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RPRD1AQ96P16 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
RPRD1AQ96P16 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RPRD1AQ96P16 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RPRD1AQ96P16 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
RPRD1AQ96P16 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
RPRD1AQ96P16 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
RPRD1AQ96P16 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RPRD1AQ96P16 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.85■□□□□ 0.29
RPRD1AQ96P16 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RPRD1AQ96P16 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
RPRD1AQ96P16 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
RPRD1AQ96P16 FAM220BP-201ENST00000377689 816 ntBASIC16.85■□□□□ 0.29
RPRD1AQ96P16 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RPRD1AQ96P16 SPDYE7P-202ENST00000420373 878 ntBASIC16.85■□□□□ 0.29
RPRD1AQ96P16 AL645939.2-201ENST00000427340 991 ntBASIC16.85■□□□□ 0.29
RPRD1AQ96P16 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC16.85■□□□□ 0.29
RPRD1AQ96P16 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.85■□□□□ 0.29
RPRD1AQ96P16 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.85■□□□□ 0.29
RPRD1AQ96P16 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.85■□□□□ 0.29
RPRD1AQ96P16 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.85■□□□□ 0.29
RPRD1AQ96P16 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RPRD1AQ96P16 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.85■□□□□ 0.29
RPRD1AQ96P16 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RPRD1AQ96P16 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
RPRD1AQ96P16 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.85■□□□□ 0.29
RPRD1AQ96P16 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.85■□□□□ 0.29
RPRD1AQ96P16 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.85■□□□□ 0.29
RPRD1AQ96P16 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RPRD1AQ96P16 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RPRD1AQ96P16 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
RPRD1AQ96P16 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RPRD1AQ96P16 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
RPRD1AQ96P16 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.84■□□□□ 0.29
RPRD1AQ96P16 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RPRD1AQ96P16 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RPRD1AQ96P16 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RPRD1AQ96P16 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.84■□□□□ 0.29
RPRD1AQ96P16 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RPRD1AQ96P16 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RPRD1AQ96P16 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RPRD1AQ96P16 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RPRD1AQ96P16 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RPRD1AQ96P16 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RPRD1AQ96P16 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
RPRD1AQ96P16 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RPRD1AQ96P16 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.84■□□□□ 0.29
RPRD1AQ96P16 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.84■□□□□ 0.29
RPRD1AQ96P16 CNN2P2-201ENST00000443536 909 ntBASIC16.84■□□□□ 0.29
RPRD1AQ96P16 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.84■□□□□ 0.29
RPRD1AQ96P16 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC16.84■□□□□ 0.29
RPRD1AQ96P16 CNN2P3-201ENST00000450201 906 ntBASIC16.84■□□□□ 0.29
RPRD1AQ96P16 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RPRD1AQ96P16 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RPRD1AQ96P16 AC069262.1-201ENST00000539058 672 ntBASIC16.84■□□□□ 0.29
RPRD1AQ96P16 AL136317.3-201ENST00000618497 906 ntBASIC16.84■□□□□ 0.29
RPRD1AQ96P16 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.84■□□□□ 0.29
RPRD1AQ96P16 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.84■□□□□ 0.29
RPRD1AQ96P16 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RPRD1AQ96P16 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RPRD1AQ96P16 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
RPRD1AQ96P16 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RPRD1AQ96P16 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RPRD1AQ96P16 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RPRD1AQ96P16 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.84■□□□□ 0.29
RPRD1AQ96P16 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
RPRD1AQ96P16 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.84■□□□□ 0.29
RPRD1AQ96P16 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
RPRD1AQ96P16 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RPRD1AQ96P16 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.84■□□□□ 0.29
RPRD1AQ96P16 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
RPRD1AQ96P16 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
RPRD1AQ96P16 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RPRD1AQ96P16 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RPRD1AQ96P16 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
RPRD1AQ96P16 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.83■□□□□ 0.28
RPRD1AQ96P16 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RPRD1AQ96P16 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
RPRD1AQ96P16 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RPRD1AQ96P16 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.83■□□□□ 0.28
RPRD1AQ96P16 FAM86GP-201ENST00000448322 971 ntBASIC16.83■□□□□ 0.28
RPRD1AQ96P16 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RPRD1AQ96P16 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RPRD1AQ96P16 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.83■□□□□ 0.28
RPRD1AQ96P16 AC008677.1-201ENST00000519230 1561 ntBASIC16.83■□□□□ 0.28
RPRD1AQ96P16 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RPRD1AQ96P16 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.83■□□□□ 0.28
RPRD1AQ96P16 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms