Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 CLN6-214ENST00000636314 442 ntTSL 3 BASIC14.12□□□□□ -0.15
CMTM3Q96MX0 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC14.12□□□□□ -0.15
CMTM3Q96MX0 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
CMTM3Q96MX0 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CMTM3Q96MX0 AC067930.6-201ENST00000623257 4947 ntBASIC14.12□□□□□ -0.15
CMTM3Q96MX0 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CMTM3Q96MX0 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.12□□□□□ -0.15
CMTM3Q96MX0 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CMTM3Q96MX0 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CMTM3Q96MX0 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CMTM3Q96MX0 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.12□□□□□ -0.15
CMTM3Q96MX0 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CMTM3Q96MX0 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.12□□□□□ -0.15
CMTM3Q96MX0 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CMTM3Q96MX0 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CMTM3Q96MX0 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CMTM3Q96MX0 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CMTM3Q96MX0 AL353732.1-201ENST00000569618 1459 ntBASIC14.12□□□□□ -0.15
CMTM3Q96MX0 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.12□□□□□ -0.15
CMTM3Q96MX0 AC079776.2-201ENST00000641154 1609 ntBASIC14.12□□□□□ -0.15
CMTM3Q96MX0 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC14.11□□□□□ -0.15
CMTM3Q96MX0 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.11□□□□□ -0.15
CMTM3Q96MX0 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CMTM3Q96MX0 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CMTM3Q96MX0 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CMTM3Q96MX0 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.11□□□□□ -0.15
CMTM3Q96MX0 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CMTM3Q96MX0 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CMTM3Q96MX0 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CMTM3Q96MX0 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
CMTM3Q96MX0 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CMTM3Q96MX0 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CMTM3Q96MX0 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CMTM3Q96MX0 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CMTM3Q96MX0 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC14.11□□□□□ -0.15
CMTM3Q96MX0 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CMTM3Q96MX0 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CMTM3Q96MX0 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CMTM3Q96MX0 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.11□□□□□ -0.15
CMTM3Q96MX0 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.11□□□□□ -0.15
CMTM3Q96MX0 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CMTM3Q96MX0 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.11□□□□□ -0.15
CMTM3Q96MX0 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CMTM3Q96MX0 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CMTM3Q96MX0 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CMTM3Q96MX0 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC14.11□□□□□ -0.15
CMTM3Q96MX0 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC14.11□□□□□ -0.15
CMTM3Q96MX0 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC14.11□□□□□ -0.15
CMTM3Q96MX0 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC14.11□□□□□ -0.15
CMTM3Q96MX0 AF228730.7-201ENST00000641842 219 ntBASIC14.11□□□□□ -0.15
CMTM3Q96MX0 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CMTM3Q96MX0 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CMTM3Q96MX0 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.11□□□□□ -0.15
CMTM3Q96MX0 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CMTM3Q96MX0 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.11□□□□□ -0.15
CMTM3Q96MX0 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
CMTM3Q96MX0 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC14.11□□□□□ -0.15
CMTM3Q96MX0 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14.11□□□□□ -0.15
CMTM3Q96MX0 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CMTM3Q96MX0 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CMTM3Q96MX0 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CMTM3Q96MX0 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.11□□□□□ -0.15
CMTM3Q96MX0 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CMTM3Q96MX0 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CMTM3Q96MX0 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CMTM3Q96MX0 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC14.1□□□□□ -0.15
CMTM3Q96MX0 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.1□□□□□ -0.15
CMTM3Q96MX0 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CMTM3Q96MX0 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CMTM3Q96MX0 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CMTM3Q96MX0 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CMTM3Q96MX0 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CMTM3Q96MX0 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CMTM3Q96MX0 NCF1C-201ENST00000438382 1427 ntBASIC14.1□□□□□ -0.15
CMTM3Q96MX0 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC14.1□□□□□ -0.15
CMTM3Q96MX0 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CMTM3Q96MX0 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CMTM3Q96MX0 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CMTM3Q96MX0 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CMTM3Q96MX0 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CMTM3Q96MX0 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CMTM3Q96MX0 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
CMTM3Q96MX0 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
CMTM3Q96MX0 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CMTM3Q96MX0 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
CMTM3Q96MX0 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC14.1□□□□□ -0.15
CMTM3Q96MX0 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CMTM3Q96MX0 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
CMTM3Q96MX0 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
CMTM3Q96MX0 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CMTM3Q96MX0 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC14.1□□□□□ -0.15
CMTM3Q96MX0 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC14.1□□□□□ -0.15
CMTM3Q96MX0 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CMTM3Q96MX0 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC14.1□□□□□ -0.15
CMTM3Q96MX0 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC14.1□□□□□ -0.15
CMTM3Q96MX0 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.1□□□□□ -0.15
CMTM3Q96MX0 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
CMTM3Q96MX0 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CMTM3Q96MX0 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.1□□□□□ -0.15
CMTM3Q96MX0 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms