Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
CHMP6Q96FZ7 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CHMP6Q96FZ7 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CHMP6Q96FZ7 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CHMP6Q96FZ7 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC16.55■□□□□ 0.24
CHMP6Q96FZ7 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CHMP6Q96FZ7 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC16.55■□□□□ 0.24
CHMP6Q96FZ7 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CHMP6Q96FZ7 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
CHMP6Q96FZ7 AL359258.3-201ENST00000622910 2331 ntBASIC16.55■□□□□ 0.24
CHMP6Q96FZ7 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CHMP6Q96FZ7 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CHMP6Q96FZ7 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CHMP6Q96FZ7 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CHMP6Q96FZ7 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CHMP6Q96FZ7 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CHMP6Q96FZ7 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CHMP6Q96FZ7 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CHMP6Q96FZ7 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.55■□□□□ 0.24
CHMP6Q96FZ7 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.55■□□□□ 0.24
CHMP6Q96FZ7 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CHMP6Q96FZ7 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.55■□□□□ 0.24
CHMP6Q96FZ7 SPDYE13P-201ENST00000445314 798 ntBASIC16.55■□□□□ 0.24
CHMP6Q96FZ7 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CHMP6Q96FZ7 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.55■□□□□ 0.24
CHMP6Q96FZ7 AC087388.1-201ENST00000571370 1112 ntBASIC16.55■□□□□ 0.24
CHMP6Q96FZ7 NTF6B-201ENST00000591913 560 ntBASIC16.55■□□□□ 0.24
CHMP6Q96FZ7 IGHV3-41-201ENST00000613121 348 ntBASIC16.55■□□□□ 0.24
CHMP6Q96FZ7 AC124864.1-201ENST00000623408 392 ntBASIC16.55■□□□□ 0.24
CHMP6Q96FZ7 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.55■□□□□ 0.24
CHMP6Q96FZ7 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CHMP6Q96FZ7 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CHMP6Q96FZ7 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC16.55■□□□□ 0.24
CHMP6Q96FZ7 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.55■□□□□ 0.24
CHMP6Q96FZ7 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CHMP6Q96FZ7 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CHMP6Q96FZ7 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CHMP6Q96FZ7 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CHMP6Q96FZ7 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CHMP6Q96FZ7 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CHMP6Q96FZ7 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.55■□□□□ 0.24
CHMP6Q96FZ7 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
CHMP6Q96FZ7 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CHMP6Q96FZ7 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.55■□□□□ 0.24
CHMP6Q96FZ7 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CHMP6Q96FZ7 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CHMP6Q96FZ7 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHMP6Q96FZ7 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CHMP6Q96FZ7 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.54■□□□□ 0.24
CHMP6Q96FZ7 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.54■□□□□ 0.24
CHMP6Q96FZ7 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.54■□□□□ 0.24
CHMP6Q96FZ7 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC16.54■□□□□ 0.24
CHMP6Q96FZ7 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHMP6Q96FZ7 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHMP6Q96FZ7 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CHMP6Q96FZ7 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHMP6Q96FZ7 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC16.54■□□□□ 0.24
CHMP6Q96FZ7 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
CHMP6Q96FZ7 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CHMP6Q96FZ7 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHMP6Q96FZ7 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.54■□□□□ 0.24
CHMP6Q96FZ7 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CHMP6Q96FZ7 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.54■□□□□ 0.24
CHMP6Q96FZ7 LTBR-211ENST00000543190 785 ntTSL 3 BASIC16.54■□□□□ 0.24
CHMP6Q96FZ7 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.54■□□□□ 0.24
CHMP6Q96FZ7 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CHMP6Q96FZ7 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHMP6Q96FZ7 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHMP6Q96FZ7 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.54■□□□□ 0.24
CHMP6Q96FZ7 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHMP6Q96FZ7 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC16.54■□□□□ 0.24
CHMP6Q96FZ7 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.54■□□□□ 0.24
CHMP6Q96FZ7 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHMP6Q96FZ7 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHMP6Q96FZ7 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHMP6Q96FZ7 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.54■□□□□ 0.24
CHMP6Q96FZ7 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CHMP6Q96FZ7 MECR-202ENST00000373791 2416 ntTSL 2 BASIC16.54■□□□□ 0.24
CHMP6Q96FZ7 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CHMP6Q96FZ7 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHMP6Q96FZ7 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHMP6Q96FZ7 LINC01144-201ENST00000626198 1710 ntBASIC16.53■□□□□ 0.24
CHMP6Q96FZ7 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHMP6Q96FZ7 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC16.53■□□□□ 0.24
CHMP6Q96FZ7 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHMP6Q96FZ7 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.53■□□□□ 0.24
CHMP6Q96FZ7 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.53■□□□□ 0.24
CHMP6Q96FZ7 PCGF3-213ENST00000620529 1899 ntBASIC16.53■□□□□ 0.24
CHMP6Q96FZ7 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHMP6Q96FZ7 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.53■□□□□ 0.24
CHMP6Q96FZ7 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHMP6Q96FZ7 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHMP6Q96FZ7 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHMP6Q96FZ7 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHMP6Q96FZ7 ACTG1P4-201ENST00000425123 1122 ntBASIC16.53■□□□□ 0.24
CHMP6Q96FZ7 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CHMP6Q96FZ7 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CHMP6Q96FZ7 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.53■□□□□ 0.24
CHMP6Q96FZ7 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.53■□□□□ 0.24
CHMP6Q96FZ7 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms