Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.65■□□□□ 0.26
RTP4Q96DX8 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RTP4Q96DX8 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RTP4Q96DX8 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.65■□□□□ 0.26
RTP4Q96DX8 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RTP4Q96DX8 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
RTP4Q96DX8 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.65■□□□□ 0.26
RTP4Q96DX8 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RTP4Q96DX8 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RTP4Q96DX8 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RTP4Q96DX8 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.65■□□□□ 0.26
RTP4Q96DX8 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RTP4Q96DX8 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.65■□□□□ 0.26
RTP4Q96DX8 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.65■□□□□ 0.26
RTP4Q96DX8 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.65■□□□□ 0.26
RTP4Q96DX8 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.65■□□□□ 0.26
RTP4Q96DX8 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.65■□□□□ 0.26
RTP4Q96DX8 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.65■□□□□ 0.26
RTP4Q96DX8 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.65■□□□□ 0.26
RTP4Q96DX8 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.65■□□□□ 0.26
RTP4Q96DX8 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.65■□□□□ 0.26
RTP4Q96DX8 AP002472.1-201ENST00000577490 586 ntBASIC16.65■□□□□ 0.26
RTP4Q96DX8 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RTP4Q96DX8 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
RTP4Q96DX8 AC068137.2-201ENST00000605408 478 ntBASIC16.65■□□□□ 0.26
RTP4Q96DX8 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.65■□□□□ 0.26
RTP4Q96DX8 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RTP4Q96DX8 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RTP4Q96DX8 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RTP4Q96DX8 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RTP4Q96DX8 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RTP4Q96DX8 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.65■□□□□ 0.26
RTP4Q96DX8 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RTP4Q96DX8 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RTP4Q96DX8 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.65■□□□□ 0.26
RTP4Q96DX8 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RTP4Q96DX8 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RTP4Q96DX8 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.65■□□□□ 0.26
RTP4Q96DX8 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
RTP4Q96DX8 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.26
RTP4Q96DX8 AC011477.6-201ENST00000604980 1927 ntBASIC16.64■□□□□ 0.26
RTP4Q96DX8 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.64■□□□□ 0.25
RTP4Q96DX8 AC092384.3-202ENST00000564646 2873 ntBASIC16.64■□□□□ 0.25
RTP4Q96DX8 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
RTP4Q96DX8 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.64■□□□□ 0.25
RTP4Q96DX8 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RTP4Q96DX8 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
RTP4Q96DX8 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RTP4Q96DX8 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RTP4Q96DX8 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RTP4Q96DX8 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RTP4Q96DX8 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
RTP4Q96DX8 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
RTP4Q96DX8 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RTP4Q96DX8 COA5-202ENST00000409997 557 ntTSL 4 BASIC16.64■□□□□ 0.25
RTP4Q96DX8 RPS8P6-201ENST00000426177 609 ntBASIC16.64■□□□□ 0.25
RTP4Q96DX8 AC004967.1-201ENST00000453589 447 ntBASIC16.64■□□□□ 0.25
RTP4Q96DX8 PRYP6-201ENST00000514804 343 ntBASIC16.64■□□□□ 0.25
RTP4Q96DX8 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.64■□□□□ 0.25
RTP4Q96DX8 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.64■□□□□ 0.25
RTP4Q96DX8 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.64■□□□□ 0.25
RTP4Q96DX8 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.64■□□□□ 0.25
RTP4Q96DX8 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.64■□□□□ 0.25
RTP4Q96DX8 AP001160.2-201ENST00000596071 487 ntBASIC16.64■□□□□ 0.25
RTP4Q96DX8 MTDHP5-201ENST00000598980 586 ntBASIC16.64■□□□□ 0.25
RTP4Q96DX8 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.64■□□□□ 0.25
RTP4Q96DX8 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.64■□□□□ 0.25
RTP4Q96DX8 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
RTP4Q96DX8 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.64■□□□□ 0.25
RTP4Q96DX8 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RTP4Q96DX8 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RTP4Q96DX8 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RTP4Q96DX8 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RTP4Q96DX8 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RTP4Q96DX8 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16.64■□□□□ 0.25
RTP4Q96DX8 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
RTP4Q96DX8 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RTP4Q96DX8 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
RTP4Q96DX8 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RTP4Q96DX8 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RTP4Q96DX8 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RTP4Q96DX8 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.64■□□□□ 0.25
RTP4Q96DX8 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
RTP4Q96DX8 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RTP4Q96DX8 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RTP4Q96DX8 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
RTP4Q96DX8 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
RTP4Q96DX8 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RTP4Q96DX8 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.63■□□□□ 0.25
RTP4Q96DX8 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
RTP4Q96DX8 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RTP4Q96DX8 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.63■□□□□ 0.25
RTP4Q96DX8 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RTP4Q96DX8 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
RTP4Q96DX8 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RTP4Q96DX8 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RTP4Q96DX8 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RTP4Q96DX8 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RTP4Q96DX8 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
RTP4Q96DX8 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms