Protein–RNA interactions for Protein: Q93038

TNFRSF25, Tumor necrosis factor receptor superfamily member 25, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25Q93038 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TNFRSF25Q93038 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC18.49■□□□□ 0.55
TNFRSF25Q93038 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
TNFRSF25Q93038 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TNFRSF25Q93038 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TNFRSF25Q93038 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TNFRSF25Q93038 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TNFRSF25Q93038 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TNFRSF25Q93038 AC138932.1-201ENST00000534164 6830 ntBASIC18.49■□□□□ 0.55
TNFRSF25Q93038 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
TNFRSF25Q93038 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC18.49■□□□□ 0.55
TNFRSF25Q93038 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC18.49■□□□□ 0.55
TNFRSF25Q93038 AL691432.1-201ENST00000596308 1422 ntBASIC18.49■□□□□ 0.55
TNFRSF25Q93038 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC18.48■□□□□ 0.55
TNFRSF25Q93038 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TNFRSF25Q93038 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TNFRSF25Q93038 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TNFRSF25Q93038 AC134407.2-201ENST00000625089 1978 ntBASIC18.48■□□□□ 0.55
TNFRSF25Q93038 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TNFRSF25Q93038 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
TNFRSF25Q93038 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC18.48■□□□□ 0.55
TNFRSF25Q93038 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
TNFRSF25Q93038 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TNFRSF25Q93038 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TNFRSF25Q93038 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC18.48■□□□□ 0.55
TNFRSF25Q93038 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TNFRSF25Q93038 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TNFRSF25Q93038 AL139400.1-201ENST00000366220 510 ntBASIC18.48■□□□□ 0.55
TNFRSF25Q93038 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC18.48■□□□□ 0.55
TNFRSF25Q93038 MIR1233-2-201ENST00000408138 82 ntBASIC18.48■□□□□ 0.55
TNFRSF25Q93038 MIR1233-1-201ENST00000408722 82 ntBASIC18.48■□□□□ 0.55
TNFRSF25Q93038 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TNFRSF25Q93038 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC18.48■□□□□ 0.55
TNFRSF25Q93038 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
TNFRSF25Q93038 PAM16-215ENST00000577031 548 ntTSL 4 BASIC18.48■□□□□ 0.55
TNFRSF25Q93038 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
TNFRSF25Q93038 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
TNFRSF25Q93038 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TNFRSF25Q93038 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TNFRSF25Q93038 AGK-211ENST00000629555 2765 ntTSL 5 BASIC18.48■□□□□ 0.55
TNFRSF25Q93038 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TNFRSF25Q93038 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC18.48■□□□□ 0.55
TNFRSF25Q93038 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TNFRSF25Q93038 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TNFRSF25Q93038 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
TNFRSF25Q93038 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
TNFRSF25Q93038 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TNFRSF25Q93038 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
TNFRSF25Q93038 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TNFRSF25Q93038 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC18.47■□□□□ 0.55
TNFRSF25Q93038 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC18.47■□□□□ 0.55
TNFRSF25Q93038 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC18.47■□□□□ 0.55
TNFRSF25Q93038 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
TNFRSF25Q93038 AP001282.1-201ENST00000531301 1499 ntBASIC18.47■□□□□ 0.55
TNFRSF25Q93038 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TNFRSF25Q93038 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TNFRSF25Q93038 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TNFRSF25Q93038 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TNFRSF25Q93038 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TNFRSF25Q93038 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TNFRSF25Q93038 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
TNFRSF25Q93038 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TNFRSF25Q93038 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
TNFRSF25Q93038 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC18.47■□□□□ 0.55
TNFRSF25Q93038 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC18.47■□□□□ 0.55
TNFRSF25Q93038 RBPMS2P1-201ENST00000437762 623 ntBASIC18.47■□□□□ 0.55
TNFRSF25Q93038 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TNFRSF25Q93038 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC18.47■□□□□ 0.55
TNFRSF25Q93038 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC18.47■□□□□ 0.55
TNFRSF25Q93038 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC18.47■□□□□ 0.55
TNFRSF25Q93038 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC18.47■□□□□ 0.55
TNFRSF25Q93038 AL596442.2-201ENST00000610240 980 ntBASIC18.47■□□□□ 0.55
TNFRSF25Q93038 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC18.47■□□□□ 0.55
TNFRSF25Q93038 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
TNFRSF25Q93038 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TNFRSF25Q93038 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC18.47■□□□□ 0.55
TNFRSF25Q93038 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
TNFRSF25Q93038 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
TNFRSF25Q93038 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC18.47■□□□□ 0.55
TNFRSF25Q93038 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TNFRSF25Q93038 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TNFRSF25Q93038 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC18.46■□□□□ 0.55
TNFRSF25Q93038 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TNFRSF25Q93038 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TNFRSF25Q93038 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TNFRSF25Q93038 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TNFRSF25Q93038 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TNFRSF25Q93038 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC18.46■□□□□ 0.55
TNFRSF25Q93038 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TNFRSF25Q93038 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
TNFRSF25Q93038 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
TNFRSF25Q93038 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TNFRSF25Q93038 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC18.46■□□□□ 0.55
TNFRSF25Q93038 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TNFRSF25Q93038 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC18.46■□□□□ 0.55
TNFRSF25Q93038 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TNFRSF25Q93038 AC011477.6-201ENST00000604980 1927 ntBASIC18.46■□□□□ 0.55
TNFRSF25Q93038 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TNFRSF25Q93038 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC18.46■□□□□ 0.55
TNFRSF25Q93038 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms