Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLDND2Q8NHS1 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLDND2Q8NHS1 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC13.96□□□□□ -0.17
CLDND2Q8NHS1 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
CLDND2Q8NHS1 BSG-215ENST00000618006 1329 ntTSL 2 BASIC13.96□□□□□ -0.17
CLDND2Q8NHS1 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLDND2Q8NHS1 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLDND2Q8NHS1 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CLDND2Q8NHS1 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLDND2Q8NHS1 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CLDND2Q8NHS1 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC13.96□□□□□ -0.17
CLDND2Q8NHS1 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CLDND2Q8NHS1 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CLDND2Q8NHS1 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
CLDND2Q8NHS1 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CLDND2Q8NHS1 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC13.96□□□□□ -0.17
CLDND2Q8NHS1 CDK2AP2P3-201ENST00000422476 372 ntBASIC13.96□□□□□ -0.17
CLDND2Q8NHS1 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLDND2Q8NHS1 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC13.96□□□□□ -0.17
CLDND2Q8NHS1 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC13.96□□□□□ -0.17
CLDND2Q8NHS1 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC13.96□□□□□ -0.17
CLDND2Q8NHS1 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC13.96□□□□□ -0.17
CLDND2Q8NHS1 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
CLDND2Q8NHS1 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLDND2Q8NHS1 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC13.96□□□□□ -0.17
CLDND2Q8NHS1 Z92544.3-201ENST00000624747 417 ntBASIC13.96□□□□□ -0.17
CLDND2Q8NHS1 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
CLDND2Q8NHS1 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC13.96□□□□□ -0.17
CLDND2Q8NHS1 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLDND2Q8NHS1 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC13.96□□□□□ -0.17
CLDND2Q8NHS1 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLDND2Q8NHS1 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLDND2Q8NHS1 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC13.96□□□□□ -0.17
CLDND2Q8NHS1 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
CLDND2Q8NHS1 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
CLDND2Q8NHS1 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC13.96□□□□□ -0.18
CLDND2Q8NHS1 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CLDND2Q8NHS1 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CLDND2Q8NHS1 STX3-203ENST00000529177 1571 ntTSL 2 BASIC13.96□□□□□ -0.18
CLDND2Q8NHS1 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CLDND2Q8NHS1 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.18
CLDND2Q8NHS1 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CLDND2Q8NHS1 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC13.96□□□□□ -0.18
CLDND2Q8NHS1 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLDND2Q8NHS1 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLDND2Q8NHS1 UXT-AS1-201ENST00000590504 1525 ntBASIC13.95□□□□□ -0.18
CLDND2Q8NHS1 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLDND2Q8NHS1 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CLDND2Q8NHS1 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CLDND2Q8NHS1 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLDND2Q8NHS1 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLDND2Q8NHS1 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC13.95□□□□□ -0.18
CLDND2Q8NHS1 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC13.95□□□□□ -0.18
CLDND2Q8NHS1 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLDND2Q8NHS1 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CLDND2Q8NHS1 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLDND2Q8NHS1 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CLDND2Q8NHS1 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CLDND2Q8NHS1 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLDND2Q8NHS1 CD99-202ENST00000381180 530 ntTSL 2 BASIC13.95□□□□□ -0.18
CLDND2Q8NHS1 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLDND2Q8NHS1 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC13.95□□□□□ -0.18
CLDND2Q8NHS1 PMS2P4-201ENST00000412466 1052 ntBASIC13.95□□□□□ -0.18
CLDND2Q8NHS1 RBPMS2P1-201ENST00000437762 623 ntBASIC13.95□□□□□ -0.18
CLDND2Q8NHS1 AC067863.1-201ENST00000494933 530 ntBASIC13.95□□□□□ -0.18
CLDND2Q8NHS1 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CLDND2Q8NHS1 VPS29-207ENST00000549970 818 ntTSL 3 BASIC13.95□□□□□ -0.18
CLDND2Q8NHS1 KRT8P23-201ENST00000560090 1207 ntBASIC13.95□□□□□ -0.18
CLDND2Q8NHS1 MIR3909-201ENST00000579518 119 ntBASIC13.95□□□□□ -0.18
CLDND2Q8NHS1 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC13.95□□□□□ -0.18
CLDND2Q8NHS1 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLDND2Q8NHS1 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLDND2Q8NHS1 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CLDND2Q8NHS1 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CLDND2Q8NHS1 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC13.95□□□□□ -0.18
CLDND2Q8NHS1 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLDND2Q8NHS1 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLDND2Q8NHS1 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CLDND2Q8NHS1 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLDND2Q8NHS1 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLDND2Q8NHS1 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLDND2Q8NHS1 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC13.95□□□□□ -0.18
CLDND2Q8NHS1 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLDND2Q8NHS1 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLDND2Q8NHS1 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CLDND2Q8NHS1 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLDND2Q8NHS1 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CLDND2Q8NHS1 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC13.94□□□□□ -0.18
CLDND2Q8NHS1 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
CLDND2Q8NHS1 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC13.94□□□□□ -0.18
CLDND2Q8NHS1 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
CLDND2Q8NHS1 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
CLDND2Q8NHS1 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
CLDND2Q8NHS1 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLDND2Q8NHS1 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLDND2Q8NHS1 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
CLDND2Q8NHS1 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLDND2Q8NHS1 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CLDND2Q8NHS1 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLDND2Q8NHS1 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms