Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ZIC4Q8N9L1 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
ZIC4Q8N9L1 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ZIC4Q8N9L1 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
ZIC4Q8N9L1 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
ZIC4Q8N9L1 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ZIC4Q8N9L1 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ZIC4Q8N9L1 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
ZIC4Q8N9L1 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ZIC4Q8N9L1 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ZIC4Q8N9L1 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.44□□□□□ -0.1
ZIC4Q8N9L1 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
ZIC4Q8N9L1 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
ZIC4Q8N9L1 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
ZIC4Q8N9L1 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
ZIC4Q8N9L1 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ZIC4Q8N9L1 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
ZIC4Q8N9L1 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.44□□□□□ -0.1
ZIC4Q8N9L1 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ZIC4Q8N9L1 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.44□□□□□ -0.1
ZIC4Q8N9L1 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ZIC4Q8N9L1 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC14.44□□□□□ -0.1
ZIC4Q8N9L1 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC14.44□□□□□ -0.1
ZIC4Q8N9L1 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ZIC4Q8N9L1 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ZIC4Q8N9L1 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ZIC4Q8N9L1 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ZIC4Q8N9L1 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ZIC4Q8N9L1 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ZIC4Q8N9L1 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ZIC4Q8N9L1 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ZIC4Q8N9L1 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC14.44□□□□□ -0.1
ZIC4Q8N9L1 SPDYE14P-201ENST00000442619 822 ntBASIC14.44□□□□□ -0.1
ZIC4Q8N9L1 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC14.44□□□□□ -0.1
ZIC4Q8N9L1 URGCP-206ENST00000446958 365 ntTSL 2 BASIC14.44□□□□□ -0.1
ZIC4Q8N9L1 HLA-J-203ENST00000494367 1087 ntBASIC14.44□□□□□ -0.1
ZIC4Q8N9L1 RNA5SP410-201ENST00000516285 106 ntBASIC14.44□□□□□ -0.1
ZIC4Q8N9L1 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.44□□□□□ -0.1
ZIC4Q8N9L1 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ZIC4Q8N9L1 AC026150.2-201ENST00000564693 1156 ntBASIC14.44□□□□□ -0.1
ZIC4Q8N9L1 AC024267.1-201ENST00000582320 895 ntBASIC14.44□□□□□ -0.1
ZIC4Q8N9L1 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC14.44□□□□□ -0.1
ZIC4Q8N9L1 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.44□□□□□ -0.1
ZIC4Q8N9L1 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC14.44□□□□□ -0.1
ZIC4Q8N9L1 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.44□□□□□ -0.1
ZIC4Q8N9L1 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.44□□□□□ -0.1
ZIC4Q8N9L1 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC14.44□□□□□ -0.1
ZIC4Q8N9L1 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ZIC4Q8N9L1 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
ZIC4Q8N9L1 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.44□□□□□ -0.1
ZIC4Q8N9L1 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ZIC4Q8N9L1 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ZIC4Q8N9L1 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
ZIC4Q8N9L1 AL391005.1-201ENST00000623953 2435 ntBASIC14.44□□□□□ -0.1
ZIC4Q8N9L1 BLK-205ENST00000529894 2017 ntTSL 5 BASIC14.44□□□□□ -0.1
ZIC4Q8N9L1 OR6D1P-203ENST00000641209 4860 ntBASIC14.44□□□□□ -0.1
ZIC4Q8N9L1 DOC2GP-204ENST00000639052 2548 ntBASIC14.44□□□□□ -0.1
ZIC4Q8N9L1 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ZIC4Q8N9L1 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.44□□□□□ -0.1
ZIC4Q8N9L1 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
ZIC4Q8N9L1 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
ZIC4Q8N9L1 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ZIC4Q8N9L1 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ZIC4Q8N9L1 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
ZIC4Q8N9L1 PGR-209ENST00000617858 2816 ntTSL 5 BASIC14.43□□□□□ -0.1
ZIC4Q8N9L1 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ZIC4Q8N9L1 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ZIC4Q8N9L1 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
ZIC4Q8N9L1 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.43□□□□□ -0.1
ZIC4Q8N9L1 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ZIC4Q8N9L1 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
ZIC4Q8N9L1 AC026691.1-201ENST00000602502 2017 ntBASIC14.43□□□□□ -0.1
ZIC4Q8N9L1 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
ZIC4Q8N9L1 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
ZIC4Q8N9L1 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ZIC4Q8N9L1 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.43□□□□□ -0.1
ZIC4Q8N9L1 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
ZIC4Q8N9L1 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC14.43□□□□□ -0.1
ZIC4Q8N9L1 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC14.43□□□□□ -0.1
ZIC4Q8N9L1 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC14.43□□□□□ -0.1
ZIC4Q8N9L1 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC14.43□□□□□ -0.1
ZIC4Q8N9L1 AC109322.1-201ENST00000524499 1264 ntBASIC14.43□□□□□ -0.1
ZIC4Q8N9L1 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.43□□□□□ -0.1
ZIC4Q8N9L1 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC14.43□□□□□ -0.1
ZIC4Q8N9L1 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
ZIC4Q8N9L1 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC14.43□□□□□ -0.1
ZIC4Q8N9L1 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14.43□□□□□ -0.1
ZIC4Q8N9L1 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC14.43□□□□□ -0.1
ZIC4Q8N9L1 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC14.43□□□□□ -0.1
ZIC4Q8N9L1 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ZIC4Q8N9L1 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
ZIC4Q8N9L1 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
ZIC4Q8N9L1 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC14.43□□□□□ -0.1
ZIC4Q8N9L1 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
ZIC4Q8N9L1 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ZIC4Q8N9L1 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ZIC4Q8N9L1 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ZIC4Q8N9L1 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
ZIC4Q8N9L1 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ZIC4Q8N9L1 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms