Protein–RNA interactions for Protein: Q8N271

PROM2, Prominin-2, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM2Q8N271 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PROM2Q8N271 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PROM2Q8N271 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC20.59■□□□□ 0.89
PROM2Q8N271 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC20.59■□□□□ 0.89
PROM2Q8N271 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PROM2Q8N271 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PROM2Q8N271 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.58■□□□□ 0.89
PROM2Q8N271 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC20.58■□□□□ 0.89
PROM2Q8N271 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC20.58■□□□□ 0.89
PROM2Q8N271 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PROM2Q8N271 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PROM2Q8N271 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC20.58■□□□□ 0.89
PROM2Q8N271 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PROM2Q8N271 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PROM2Q8N271 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PROM2Q8N271 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC20.58■□□□□ 0.89
PROM2Q8N271 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PROM2Q8N271 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PROM2Q8N271 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
PROM2Q8N271 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
PROM2Q8N271 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PROM2Q8N271 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC20.58■□□□□ 0.89
PROM2Q8N271 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
PROM2Q8N271 FADS2-212ENST00000522639 360 ntTSL 5 BASIC20.58■□□□□ 0.89
PROM2Q8N271 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC20.58■□□□□ 0.89
PROM2Q8N271 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC20.58■□□□□ 0.89
PROM2Q8N271 AC120045.2-201ENST00000567334 178 ntBASIC20.58■□□□□ 0.89
PROM2Q8N271 FADS2-215ENST00000574708 385 ntTSL 3 BASIC20.58■□□□□ 0.89
PROM2Q8N271 AC005695.3-201ENST00000614522 232 ntBASIC20.58■□□□□ 0.89
PROM2Q8N271 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC20.58■□□□□ 0.89
PROM2Q8N271 HARS-202ENST00000415192 1401 ntTSL 2 BASIC20.58■□□□□ 0.88
PROM2Q8N271 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC20.58■□□□□ 0.88
PROM2Q8N271 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PROM2Q8N271 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
PROM2Q8N271 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC20.57■□□□□ 0.88
PROM2Q8N271 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
PROM2Q8N271 COMP-202ENST00000425807 2292 ntTSL 2 BASIC20.57■□□□□ 0.88
PROM2Q8N271 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PROM2Q8N271 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PROM2Q8N271 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC20.57■□□□□ 0.88
PROM2Q8N271 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC20.57■□□□□ 0.88
PROM2Q8N271 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
PROM2Q8N271 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PROM2Q8N271 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PROM2Q8N271 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PROM2Q8N271 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PROM2Q8N271 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC20.57■□□□□ 0.88
PROM2Q8N271 RPS2P36-201ENST00000456516 831 ntBASIC20.57■□□□□ 0.88
PROM2Q8N271 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
PROM2Q8N271 Metazoa_SRP.12-201ENST00000553249 268 ntBASIC20.57■□□□□ 0.88
PROM2Q8N271 MIR3619-201ENST00000579667 83 ntBASIC20.57■□□□□ 0.88
PROM2Q8N271 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
PROM2Q8N271 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PROM2Q8N271 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PROM2Q8N271 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PROM2Q8N271 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
PROM2Q8N271 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
PROM2Q8N271 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC20.57■□□□□ 0.88
PROM2Q8N271 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PROM2Q8N271 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
PROM2Q8N271 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.56■□□□□ 0.88
PROM2Q8N271 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PROM2Q8N271 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PROM2Q8N271 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
PROM2Q8N271 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
PROM2Q8N271 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
PROM2Q8N271 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PROM2Q8N271 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PROM2Q8N271 RPS3-201ENST00000278572 907 ntTSL 3 BASIC20.56■□□□□ 0.88
PROM2Q8N271 C1QBPP1-201ENST00000400117 770 ntBASIC20.56■□□□□ 0.88
PROM2Q8N271 AC004898.1-201ENST00000451057 766 ntBASIC20.56■□□□□ 0.88
PROM2Q8N271 MBP-227ENST00000526111 581 ntTSL 4 BASIC20.56■□□□□ 0.88
PROM2Q8N271 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC20.56■□□□□ 0.88
PROM2Q8N271 RERG-205ENST00000537647 935 ntTSL 2 BASIC20.56■□□□□ 0.88
PROM2Q8N271 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC20.56■□□□□ 0.88
PROM2Q8N271 AP001063.1-201ENST00000568332 529 ntBASIC20.56■□□□□ 0.88
PROM2Q8N271 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC20.56■□□□□ 0.88
PROM2Q8N271 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC20.56■□□□□ 0.88
PROM2Q8N271 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC20.56■□□□□ 0.88
PROM2Q8N271 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
PROM2Q8N271 AC128714.1-201ENST00000637035 887 ntBASIC20.56■□□□□ 0.88
PROM2Q8N271 AL139011.1-202ENST00000642063 584 ntBASIC20.56■□□□□ 0.88
PROM2Q8N271 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
PROM2Q8N271 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PROM2Q8N271 GPAA1P2-202ENST00000606848 1787 ntBASIC20.56■□□□□ 0.88
PROM2Q8N271 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PROM2Q8N271 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC20.56■□□□□ 0.88
PROM2Q8N271 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PROM2Q8N271 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
PROM2Q8N271 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC20.56■□□□□ 0.88
PROM2Q8N271 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PROM2Q8N271 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC20.56■□□□□ 0.88
PROM2Q8N271 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PROM2Q8N271 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PROM2Q8N271 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PROM2Q8N271 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PROM2Q8N271 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PROM2Q8N271 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PROM2Q8N271 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PROM2Q8N271 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms