Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.74■□□□□ 0.27
SIX5Q8N196 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.74■□□□□ 0.27
SIX5Q8N196 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SIX5Q8N196 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.74■□□□□ 0.27
SIX5Q8N196 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
SIX5Q8N196 CICP6-201ENST00000457191 2729 ntBASIC16.74■□□□□ 0.27
SIX5Q8N196 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
SIX5Q8N196 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.74■□□□□ 0.27
SIX5Q8N196 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
SIX5Q8N196 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC16.74■□□□□ 0.27
SIX5Q8N196 BOLA2P3-201ENST00000404566 256 ntBASIC16.74■□□□□ 0.27
SIX5Q8N196 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC16.74■□□□□ 0.27
SIX5Q8N196 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SIX5Q8N196 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC16.74■□□□□ 0.27
SIX5Q8N196 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
SIX5Q8N196 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC16.74■□□□□ 0.27
SIX5Q8N196 USB1-203ENST00000539737 1212 ntTSL 2 BASIC16.74■□□□□ 0.27
SIX5Q8N196 NAA38-207ENST00000576861 556 ntTSL 3 BASIC16.74■□□□□ 0.27
SIX5Q8N196 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
SIX5Q8N196 WFDC1-204ENST00000613603 549 ntBASIC16.74■□□□□ 0.27
SIX5Q8N196 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SIX5Q8N196 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC16.74■□□□□ 0.27
SIX5Q8N196 AC068587.10-201ENST00000641210 219 ntBASIC16.74■□□□□ 0.27
SIX5Q8N196 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SIX5Q8N196 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SIX5Q8N196 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SIX5Q8N196 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SIX5Q8N196 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SIX5Q8N196 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.74■□□□□ 0.27
SIX5Q8N196 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SIX5Q8N196 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SIX5Q8N196 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
SIX5Q8N196 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SIX5Q8N196 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SIX5Q8N196 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SIX5Q8N196 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
SIX5Q8N196 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
SIX5Q8N196 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SIX5Q8N196 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SIX5Q8N196 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.73■□□□□ 0.27
SIX5Q8N196 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.73■□□□□ 0.27
SIX5Q8N196 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SIX5Q8N196 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
SIX5Q8N196 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.73■□□□□ 0.27
SIX5Q8N196 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
SIX5Q8N196 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
SIX5Q8N196 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
SIX5Q8N196 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SIX5Q8N196 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
SIX5Q8N196 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC16.73■□□□□ 0.27
SIX5Q8N196 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.73■□□□□ 0.27
SIX5Q8N196 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SIX5Q8N196 ACTBP11-201ENST00000436287 1126 ntBASIC16.73■□□□□ 0.27
SIX5Q8N196 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SIX5Q8N196 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC16.73■□□□□ 0.27
SIX5Q8N196 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SIX5Q8N196 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC16.73■□□□□ 0.27
SIX5Q8N196 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.73■□□□□ 0.27
SIX5Q8N196 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC16.73■□□□□ 0.27
SIX5Q8N196 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
SIX5Q8N196 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC16.73■□□□□ 0.27
SIX5Q8N196 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC16.73■□□□□ 0.27
SIX5Q8N196 MIR6787-201ENST00000616675 61 ntBASIC16.73■□□□□ 0.27
SIX5Q8N196 IMPDH1P4-201ENST00000445028 1534 ntBASIC16.73■□□□□ 0.27
SIX5Q8N196 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SIX5Q8N196 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
SIX5Q8N196 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SIX5Q8N196 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SIX5Q8N196 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.73■□□□□ 0.27
SIX5Q8N196 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
SIX5Q8N196 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SIX5Q8N196 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SIX5Q8N196 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.73■□□□□ 0.27
SIX5Q8N196 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SIX5Q8N196 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SIX5Q8N196 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SIX5Q8N196 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.73■□□□□ 0.27
SIX5Q8N196 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SIX5Q8N196 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SIX5Q8N196 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.72■□□□□ 0.27
SIX5Q8N196 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SIX5Q8N196 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.72■□□□□ 0.27
SIX5Q8N196 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SIX5Q8N196 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC16.72■□□□□ 0.27
SIX5Q8N196 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SIX5Q8N196 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC16.72■□□□□ 0.27
SIX5Q8N196 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.72■□□□□ 0.27
SIX5Q8N196 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SIX5Q8N196 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SIX5Q8N196 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.72■□□□□ 0.27
SIX5Q8N196 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SIX5Q8N196 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
SIX5Q8N196 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SIX5Q8N196 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SIX5Q8N196 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SIX5Q8N196 ANKRD19P-201ENST00000338192 862 ntBASIC16.72■□□□□ 0.27
SIX5Q8N196 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SIX5Q8N196 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SIX5Q8N196 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
SIX5Q8N196 MFF-223ENST00000524634 647 ntTSL 2 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms