Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC9.92□□□□□ -0.82
VPS13BQ7Z7G8 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
VPS13BQ7Z7G8 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC9.92□□□□□ -0.82
VPS13BQ7Z7G8 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
VPS13BQ7Z7G8 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
VPS13BQ7Z7G8 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC9.92□□□□□ -0.82
VPS13BQ7Z7G8 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC9.92□□□□□ -0.82
VPS13BQ7Z7G8 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC9.92□□□□□ -0.82
VPS13BQ7Z7G8 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
VPS13BQ7Z7G8 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
VPS13BQ7Z7G8 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
VPS13BQ7Z7G8 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
VPS13BQ7Z7G8 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
VPS13BQ7Z7G8 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC9.92□□□□□ -0.82
VPS13BQ7Z7G8 CNN2P8-201ENST00000421872 913 ntBASIC9.92□□□□□ -0.82
VPS13BQ7Z7G8 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC9.92□□□□□ -0.82
VPS13BQ7Z7G8 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
VPS13BQ7Z7G8 PFN2-215ENST00000497148 743 ntTSL 4 BASIC9.92□□□□□ -0.82
VPS13BQ7Z7G8 RN7SL560P-201ENST00000577943 264 ntBASIC9.92□□□□□ -0.82
VPS13BQ7Z7G8 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC9.92□□□□□ -0.82
VPS13BQ7Z7G8 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC9.92□□□□□ -0.82
VPS13BQ7Z7G8 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
VPS13BQ7Z7G8 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC9.92□□□□□ -0.82
VPS13BQ7Z7G8 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
VPS13BQ7Z7G8 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
VPS13BQ7Z7G8 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC9.92□□□□□ -0.82
VPS13BQ7Z7G8 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC9.92□□□□□ -0.82
VPS13BQ7Z7G8 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC9.92□□□□□ -0.82
VPS13BQ7Z7G8 U82695.1-201ENST00000635752 1889 ntBASIC9.92□□□□□ -0.82
VPS13BQ7Z7G8 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC9.92□□□□□ -0.82
VPS13BQ7Z7G8 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
VPS13BQ7Z7G8 IMPDH1P4-201ENST00000445028 1534 ntBASIC9.92□□□□□ -0.82
VPS13BQ7Z7G8 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
VPS13BQ7Z7G8 MIR326-201ENST00000362220 95 ntBASIC9.92□□□□□ -0.82
VPS13BQ7Z7G8 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC9.92□□□□□ -0.82
VPS13BQ7Z7G8 RPL28-203ENST00000428193 573 ntTSL 2 BASIC9.92□□□□□ -0.82
VPS13BQ7Z7G8 AC253536.4-201ENST00000440539 267 ntBASIC9.92□□□□□ -0.82
VPS13BQ7Z7G8 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC9.92□□□□□ -0.82
VPS13BQ7Z7G8 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
VPS13BQ7Z7G8 RPL28-207ENST00000558815 616 ntTSL 2 BASIC9.92□□□□□ -0.82
VPS13BQ7Z7G8 RARRES2P5-201ENST00000564013 466 ntBASIC9.92□□□□□ -0.82
VPS13BQ7Z7G8 AC024267.1-201ENST00000582320 895 ntBASIC9.92□□□□□ -0.82
VPS13BQ7Z7G8 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC9.92□□□□□ -0.82
VPS13BQ7Z7G8 SPCS2P2-201ENST00000603270 608 ntBASIC9.92□□□□□ -0.82
VPS13BQ7Z7G8 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
VPS13BQ7Z7G8 AC128714.1-201ENST00000637035 887 ntBASIC9.92□□□□□ -0.82
VPS13BQ7Z7G8 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC9.92□□□□□ -0.82
VPS13BQ7Z7G8 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
VPS13BQ7Z7G8 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
VPS13BQ7Z7G8 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC9.92□□□□□ -0.82
VPS13BQ7Z7G8 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
VPS13BQ7Z7G8 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
VPS13BQ7Z7G8 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
VPS13BQ7Z7G8 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC9.91□□□□□ -0.82
VPS13BQ7Z7G8 AL008638.5-201ENST00000623814 1298 ntBASIC9.91□□□□□ -0.82
VPS13BQ7Z7G8 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC9.91□□□□□ -0.82
VPS13BQ7Z7G8 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
VPS13BQ7Z7G8 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
VPS13BQ7Z7G8 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
VPS13BQ7Z7G8 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC9.91□□□□□ -0.82
VPS13BQ7Z7G8 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
VPS13BQ7Z7G8 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC9.91□□□□□ -0.82
VPS13BQ7Z7G8 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC9.91□□□□□ -0.82
VPS13BQ7Z7G8 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
VPS13BQ7Z7G8 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
VPS13BQ7Z7G8 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
VPS13BQ7Z7G8 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
VPS13BQ7Z7G8 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC9.91□□□□□ -0.82
VPS13BQ7Z7G8 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
VPS13BQ7Z7G8 APOA1-205ENST00000375329 927 ntTSL 2 BASIC9.91□□□□□ -0.82
VPS13BQ7Z7G8 LBH-202ENST00000401506 485 ntTSL 3 BASIC9.91□□□□□ -0.82
VPS13BQ7Z7G8 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC9.91□□□□□ -0.82
VPS13BQ7Z7G8 AC007551.1-201ENST00000457394 519 ntBASIC9.91□□□□□ -0.82
VPS13BQ7Z7G8 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC9.91□□□□□ -0.82
VPS13BQ7Z7G8 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC9.91□□□□□ -0.82
VPS13BQ7Z7G8 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC9.91□□□□□ -0.82
VPS13BQ7Z7G8 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC9.91□□□□□ -0.82
VPS13BQ7Z7G8 ENPP7P5-201ENST00000541031 1031 ntBASIC9.91□□□□□ -0.82
VPS13BQ7Z7G8 GNRHR2-203ENST00000581100 1187 ntBASIC9.91□□□□□ -0.82
VPS13BQ7Z7G8 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC9.91□□□□□ -0.82
VPS13BQ7Z7G8 CU634019.7-201ENST00000624153 1185 ntBASIC9.91□□□□□ -0.82
VPS13BQ7Z7G8 FP236241.2-201ENST00000624906 1185 ntBASIC9.91□□□□□ -0.82
VPS13BQ7Z7G8 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
VPS13BQ7Z7G8 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
VPS13BQ7Z7G8 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC9.91□□□□□ -0.82
VPS13BQ7Z7G8 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
VPS13BQ7Z7G8 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
VPS13BQ7Z7G8 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
VPS13BQ7Z7G8 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
VPS13BQ7Z7G8 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
VPS13BQ7Z7G8 TUBB8P12-201ENST00000308911 1335 ntBASIC9.91□□□□□ -0.82
VPS13BQ7Z7G8 TUBB7P-202ENST00000428444 1305 ntBASIC9.91□□□□□ -0.82
VPS13BQ7Z7G8 TUBB8P7-204ENST00000567960 1332 ntBASIC9.91□□□□□ -0.82
VPS13BQ7Z7G8 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC9.91□□□□□ -0.82
VPS13BQ7Z7G8 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
VPS13BQ7Z7G8 DPM2-202ENST00000373110 738 ntTSL 2 BASIC9.91□□□□□ -0.82
VPS13BQ7Z7G8 BTBD6P1-201ENST00000412176 1267 ntBASIC9.91□□□□□ -0.82
VPS13BQ7Z7G8 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC9.91□□□□□ -0.82
VPS13BQ7Z7G8 AC026954.1-201ENST00000429771 1293 ntBASIC9.91□□□□□ -0.82
VPS13BQ7Z7G8 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms