Protein–RNA interactions for Protein: Q70EL2

USP45, Ubiquitin carboxyl-terminal hydrolase 45, humanhuman

Predictions only

Length 814 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP45Q70EL2 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.39■□□□□ 0.22
USP45Q70EL2 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
USP45Q70EL2 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.39■□□□□ 0.21
USP45Q70EL2 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
USP45Q70EL2 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
USP45Q70EL2 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
USP45Q70EL2 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.39■□□□□ 0.21
USP45Q70EL2 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
USP45Q70EL2 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
USP45Q70EL2 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
USP45Q70EL2 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
USP45Q70EL2 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.39■□□□□ 0.21
USP45Q70EL2 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
USP45Q70EL2 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
USP45Q70EL2 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
USP45Q70EL2 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
USP45Q70EL2 AL139400.1-201ENST00000366220 510 ntBASIC16.39■□□□□ 0.21
USP45Q70EL2 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
USP45Q70EL2 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.39■□□□□ 0.21
USP45Q70EL2 SPDYE7P-202ENST00000420373 878 ntBASIC16.39■□□□□ 0.21
USP45Q70EL2 SPDYE14P-201ENST00000442619 822 ntBASIC16.39■□□□□ 0.21
USP45Q70EL2 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.39■□□□□ 0.21
USP45Q70EL2 AC026150.2-201ENST00000564693 1156 ntBASIC16.39■□□□□ 0.21
USP45Q70EL2 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.39■□□□□ 0.21
USP45Q70EL2 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.39■□□□□ 0.21
USP45Q70EL2 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.39■□□□□ 0.21
USP45Q70EL2 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
USP45Q70EL2 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
USP45Q70EL2 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.39■□□□□ 0.21
USP45Q70EL2 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
USP45Q70EL2 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
USP45Q70EL2 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
USP45Q70EL2 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
USP45Q70EL2 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.39■□□□□ 0.21
USP45Q70EL2 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
USP45Q70EL2 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
USP45Q70EL2 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
USP45Q70EL2 AP3S2-216ENST00000617003 1561 ntBASIC16.38■□□□□ 0.21
USP45Q70EL2 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
USP45Q70EL2 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
USP45Q70EL2 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
USP45Q70EL2 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
USP45Q70EL2 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
USP45Q70EL2 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
USP45Q70EL2 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
USP45Q70EL2 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
USP45Q70EL2 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
USP45Q70EL2 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
USP45Q70EL2 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
USP45Q70EL2 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
USP45Q70EL2 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
USP45Q70EL2 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
USP45Q70EL2 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
USP45Q70EL2 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.38■□□□□ 0.21
USP45Q70EL2 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
USP45Q70EL2 PON3-203ENST00000427422 894 ntTSL 3 BASIC16.38■□□□□ 0.21
USP45Q70EL2 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.38■□□□□ 0.21
USP45Q70EL2 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.38■□□□□ 0.21
USP45Q70EL2 CNN2P2-201ENST00000443536 909 ntBASIC16.38■□□□□ 0.21
USP45Q70EL2 CNN2P3-201ENST00000450201 906 ntBASIC16.38■□□□□ 0.21
USP45Q70EL2 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.38■□□□□ 0.21
USP45Q70EL2 AL512356.2-201ENST00000546955 174 ntBASIC16.38■□□□□ 0.21
USP45Q70EL2 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.38■□□□□ 0.21
USP45Q70EL2 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.38■□□□□ 0.21
USP45Q70EL2 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.38■□□□□ 0.21
USP45Q70EL2 AL136317.3-201ENST00000618497 906 ntBASIC16.38■□□□□ 0.21
USP45Q70EL2 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.38■□□□□ 0.21
USP45Q70EL2 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.38■□□□□ 0.21
USP45Q70EL2 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
USP45Q70EL2 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
USP45Q70EL2 AC124067.4-201ENST00000519691 2379 ntBASIC16.38■□□□□ 0.21
USP45Q70EL2 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
USP45Q70EL2 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
USP45Q70EL2 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
USP45Q70EL2 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.38■□□□□ 0.21
USP45Q70EL2 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
USP45Q70EL2 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
USP45Q70EL2 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
USP45Q70EL2 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.37■□□□□ 0.21
USP45Q70EL2 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
USP45Q70EL2 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
USP45Q70EL2 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
USP45Q70EL2 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
USP45Q70EL2 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
USP45Q70EL2 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
USP45Q70EL2 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
USP45Q70EL2 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
USP45Q70EL2 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
USP45Q70EL2 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
USP45Q70EL2 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.37■□□□□ 0.21
USP45Q70EL2 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
USP45Q70EL2 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
USP45Q70EL2 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
USP45Q70EL2 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
USP45Q70EL2 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
USP45Q70EL2 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
USP45Q70EL2 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.37■□□□□ 0.21
USP45Q70EL2 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.37■□□□□ 0.21
USP45Q70EL2 AL592424.1-201ENST00000563624 1536 ntBASIC16.37■□□□□ 0.21
USP45Q70EL2 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms