Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC19.57■□□□□ 0.72
RNF20Q5VTR2 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF20Q5VTR2 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
RNF20Q5VTR2 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC19.57■□□□□ 0.72
RNF20Q5VTR2 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
RNF20Q5VTR2 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF20Q5VTR2 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF20Q5VTR2 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF20Q5VTR2 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF20Q5VTR2 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC19.57■□□□□ 0.72
RNF20Q5VTR2 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF20Q5VTR2 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
RNF20Q5VTR2 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
RNF20Q5VTR2 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC19.57■□□□□ 0.72
RNF20Q5VTR2 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RNF20Q5VTR2 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RNF20Q5VTR2 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
RNF20Q5VTR2 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF20Q5VTR2 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF20Q5VTR2 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF20Q5VTR2 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RNF20Q5VTR2 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF20Q5VTR2 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF20Q5VTR2 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC19.57■□□□□ 0.72
RNF20Q5VTR2 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
RNF20Q5VTR2 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC19.56■□□□□ 0.72
RNF20Q5VTR2 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC19.56■□□□□ 0.72
RNF20Q5VTR2 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF20Q5VTR2 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF20Q5VTR2 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC19.56■□□□□ 0.72
RNF20Q5VTR2 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF20Q5VTR2 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC19.56■□□□□ 0.72
RNF20Q5VTR2 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
RNF20Q5VTR2 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RNF20Q5VTR2 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
RNF20Q5VTR2 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF20Q5VTR2 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC19.56■□□□□ 0.72
RNF20Q5VTR2 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC19.56■□□□□ 0.72
RNF20Q5VTR2 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
RNF20Q5VTR2 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC19.56■□□□□ 0.72
RNF20Q5VTR2 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
RNF20Q5VTR2 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RNF20Q5VTR2 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC19.56■□□□□ 0.72
RNF20Q5VTR2 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RNF20Q5VTR2 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF20Q5VTR2 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
RNF20Q5VTR2 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF20Q5VTR2 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC19.56■□□□□ 0.72
RNF20Q5VTR2 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF20Q5VTR2 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC19.56■□□□□ 0.72
RNF20Q5VTR2 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF20Q5VTR2 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF20Q5VTR2 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC19.56■□□□□ 0.72
RNF20Q5VTR2 AC022188.1-201ENST00000620960 1664 ntBASIC19.56■□□□□ 0.72
RNF20Q5VTR2 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF20Q5VTR2 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF20Q5VTR2 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC19.55■□□□□ 0.72
RNF20Q5VTR2 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF20Q5VTR2 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF20Q5VTR2 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC19.55■□□□□ 0.72
RNF20Q5VTR2 AC073439.1-201ENST00000624121 1774 ntBASIC19.55■□□□□ 0.72
RNF20Q5VTR2 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
RNF20Q5VTR2 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC19.55■□□□□ 0.72
RNF20Q5VTR2 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF20Q5VTR2 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RNF20Q5VTR2 MIR648-201ENST00000385046 94 ntBASIC19.55■□□□□ 0.72
RNF20Q5VTR2 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC19.55■□□□□ 0.72
RNF20Q5VTR2 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC19.55■□□□□ 0.72
RNF20Q5VTR2 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC19.55■□□□□ 0.72
RNF20Q5VTR2 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC19.55■□□□□ 0.72
RNF20Q5VTR2 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC19.55■□□□□ 0.72
RNF20Q5VTR2 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC19.55■□□□□ 0.72
RNF20Q5VTR2 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF20Q5VTR2 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC19.54■□□□□ 0.72
RNF20Q5VTR2 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RNF20Q5VTR2 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF20Q5VTR2 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF20Q5VTR2 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
RNF20Q5VTR2 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF20Q5VTR2 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC19.54■□□□□ 0.72
RNF20Q5VTR2 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC19.54■□□□□ 0.72
RNF20Q5VTR2 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF20Q5VTR2 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC19.54■□□□□ 0.72
RNF20Q5VTR2 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RNF20Q5VTR2 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF20Q5VTR2 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC19.54■□□□□ 0.72
RNF20Q5VTR2 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF20Q5VTR2 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC19.54■□□□□ 0.72
RNF20Q5VTR2 RELA-227ENST00000615805 2236 ntTSL 5 BASIC19.54■□□□□ 0.72
RNF20Q5VTR2 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF20Q5VTR2 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
RNF20Q5VTR2 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RNF20Q5VTR2 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RNF20Q5VTR2 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC19.54■□□□□ 0.72
RNF20Q5VTR2 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RNF20Q5VTR2 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF20Q5VTR2 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF20Q5VTR2 AC040169.1-201ENST00000565382 521 ntBASIC19.54■□□□□ 0.72
RNF20Q5VTR2 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF20Q5VTR2 COX5A-206ENST00000568783 571 ntTSL 3 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms