Protein–RNA interactions for Protein: Q00535

CDK5, Cyclin-dependent-like kinase 5, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5Q00535 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.78□□□□□ -0.04
CDK5Q00535 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDK5Q00535 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDK5Q00535 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
CDK5Q00535 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CDK5Q00535 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDK5Q00535 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
CDK5Q00535 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CDK5Q00535 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CDK5Q00535 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.78□□□□□ -0.04
CDK5Q00535 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDK5Q00535 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC14.78□□□□□ -0.04
CDK5Q00535 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDK5Q00535 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CDK5Q00535 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
CDK5Q00535 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDK5Q00535 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDK5Q00535 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC14.78□□□□□ -0.04
CDK5Q00535 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.78□□□□□ -0.04
CDK5Q00535 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDK5Q00535 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CDK5Q00535 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDK5Q00535 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDK5Q00535 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC14.78□□□□□ -0.04
CDK5Q00535 MTRF1LP2-201ENST00000506027 1122 ntBASIC14.78□□□□□ -0.04
CDK5Q00535 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC14.78□□□□□ -0.04
CDK5Q00535 TPM1-218ENST00000559281 851 ntTSL 5 BASIC14.78□□□□□ -0.04
CDK5Q00535 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC14.78□□□□□ -0.04
CDK5Q00535 PNMT-203ENST00000581428 677 ntTSL 2 BASIC14.78□□□□□ -0.04
CDK5Q00535 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC14.78□□□□□ -0.04
CDK5Q00535 AL121772.3-201ENST00000610840 674 ntBASIC14.78□□□□□ -0.04
CDK5Q00535 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC14.78□□□□□ -0.04
CDK5Q00535 REXO1L6P-202ENST00000619970 1078 ntBASIC14.78□□□□□ -0.04
CDK5Q00535 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC14.78□□□□□ -0.04
CDK5Q00535 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CDK5Q00535 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDK5Q00535 AC006486.2-201ENST00000624246 2199 ntBASIC14.78□□□□□ -0.04
CDK5Q00535 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDK5Q00535 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CDK5Q00535 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDK5Q00535 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDK5Q00535 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CDK5Q00535 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDK5Q00535 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.78□□□□□ -0.04
CDK5Q00535 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CDK5Q00535 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CDK5Q00535 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.77□□□□□ -0.04
CDK5Q00535 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
CDK5Q00535 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
CDK5Q00535 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CDK5Q00535 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.77□□□□□ -0.04
CDK5Q00535 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CDK5Q00535 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
CDK5Q00535 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.77□□□□□ -0.04
CDK5Q00535 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CDK5Q00535 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CDK5Q00535 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CDK5Q00535 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.04
CDK5Q00535 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
CDK5Q00535 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CDK5Q00535 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CDK5Q00535 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CDK5Q00535 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
CDK5Q00535 IGHV3-65-201ENST00000523210 341 ntBASIC14.77□□□□□ -0.05
CDK5Q00535 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
CDK5Q00535 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CDK5Q00535 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC14.77□□□□□ -0.05
CDK5Q00535 AC021097.1-201ENST00000607902 574 ntBASIC14.77□□□□□ -0.05
CDK5Q00535 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDK5Q00535 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.77□□□□□ -0.05
CDK5Q00535 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
CDK5Q00535 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.77□□□□□ -0.05
CDK5Q00535 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDK5Q00535 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CDK5Q00535 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.77□□□□□ -0.05
CDK5Q00535 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDK5Q00535 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDK5Q00535 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CDK5Q00535 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.77□□□□□ -0.05
CDK5Q00535 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CDK5Q00535 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CDK5Q00535 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.77□□□□□ -0.05
CDK5Q00535 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CDK5Q00535 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.77□□□□□ -0.05
CDK5Q00535 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDK5Q00535 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CDK5Q00535 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDK5Q00535 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDK5Q00535 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDK5Q00535 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDK5Q00535 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDK5Q00535 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.76□□□□□ -0.05
CDK5Q00535 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDK5Q00535 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDK5Q00535 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.76□□□□□ -0.05
CDK5Q00535 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDK5Q00535 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDK5Q00535 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDK5Q00535 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDK5Q00535 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms