Protein–RNA interactions for Protein: P78348

ASIC1, Acid-sensing ion channel 1, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC1P78348 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC18.3■□□□□ 0.52
ASIC1P78348 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
ASIC1P78348 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ASIC1P78348 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
ASIC1P78348 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC18.3■□□□□ 0.52
ASIC1P78348 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ASIC1P78348 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
ASIC1P78348 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC18.3■□□□□ 0.52
ASIC1P78348 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ASIC1P78348 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
ASIC1P78348 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ASIC1P78348 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ASIC1P78348 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC18.3■□□□□ 0.52
ASIC1P78348 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ASIC1P78348 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC18.3■□□□□ 0.52
ASIC1P78348 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC18.3■□□□□ 0.52
ASIC1P78348 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
ASIC1P78348 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ASIC1P78348 AL592424.1-201ENST00000563624 1536 ntBASIC18.29■□□□□ 0.52
ASIC1P78348 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
ASIC1P78348 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ASIC1P78348 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
ASIC1P78348 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ASIC1P78348 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC18.29■□□□□ 0.52
ASIC1P78348 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ASIC1P78348 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
ASIC1P78348 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC18.29■□□□□ 0.52
ASIC1P78348 MIR940-201ENST00000401276 94 ntBASIC18.29■□□□□ 0.52
ASIC1P78348 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
ASIC1P78348 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
ASIC1P78348 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC18.29■□□□□ 0.52
ASIC1P78348 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC18.29■□□□□ 0.52
ASIC1P78348 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
ASIC1P78348 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC18.29■□□□□ 0.52
ASIC1P78348 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ASIC1P78348 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ASIC1P78348 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ASIC1P78348 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
ASIC1P78348 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ASIC1P78348 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
ASIC1P78348 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ASIC1P78348 AC024909.3-201ENST00000611513 2257 ntBASIC18.29■□□□□ 0.52
ASIC1P78348 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
ASIC1P78348 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC18.29■□□□□ 0.52
ASIC1P78348 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
ASIC1P78348 U82695.1-201ENST00000635752 1889 ntBASIC18.29■□□□□ 0.52
ASIC1P78348 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
ASIC1P78348 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ASIC1P78348 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
ASIC1P78348 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC18.28■□□□□ 0.52
ASIC1P78348 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ASIC1P78348 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ASIC1P78348 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC18.28■□□□□ 0.52
ASIC1P78348 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC18.28■□□□□ 0.52
ASIC1P78348 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC18.28■□□□□ 0.52
ASIC1P78348 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ASIC1P78348 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC18.28■□□□□ 0.52
ASIC1P78348 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC18.28■□□□□ 0.52
ASIC1P78348 AP002472.1-201ENST00000577490 586 ntBASIC18.28■□□□□ 0.52
ASIC1P78348 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC18.28■□□□□ 0.52
ASIC1P78348 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC18.28■□□□□ 0.52
ASIC1P78348 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
ASIC1P78348 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
ASIC1P78348 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC18.28■□□□□ 0.52
ASIC1P78348 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC18.28■□□□□ 0.52
ASIC1P78348 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC18.28■□□□□ 0.52
ASIC1P78348 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
ASIC1P78348 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
ASIC1P78348 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC18.28■□□□□ 0.52
ASIC1P78348 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ASIC1P78348 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ASIC1P78348 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC18.28■□□□□ 0.52
ASIC1P78348 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC18.28■□□□□ 0.52
ASIC1P78348 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
ASIC1P78348 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC18.28■□□□□ 0.52
ASIC1P78348 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ASIC1P78348 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
ASIC1P78348 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC18.27■□□□□ 0.52
ASIC1P78348 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC18.27■□□□□ 0.52
ASIC1P78348 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC18.27■□□□□ 0.52
ASIC1P78348 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ASIC1P78348 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
ASIC1P78348 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ASIC1P78348 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ASIC1P78348 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
ASIC1P78348 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
ASIC1P78348 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
ASIC1P78348 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC18.27■□□□□ 0.52
ASIC1P78348 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ASIC1P78348 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ASIC1P78348 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ASIC1P78348 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
ASIC1P78348 WASH6P-202ENST00000359512 1437 ntBASIC18.27■□□□□ 0.52
ASIC1P78348 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
ASIC1P78348 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
ASIC1P78348 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ASIC1P78348 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ASIC1P78348 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ASIC1P78348 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ASIC1P78348 AC023274.1-201ENST00000418278 595 ntBASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms