Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CXCR4P61073 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CXCR4P61073 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CXCR4P61073 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CXCR4P61073 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CXCR4P61073 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
CXCR4P61073 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
CXCR4P61073 NORAD-201ENST00000565493 5339 ntBASIC14.96□□□□□ -0.01
CXCR4P61073 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.96□□□□□ -0.01
CXCR4P61073 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.96□□□□□ -0.01
CXCR4P61073 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CXCR4P61073 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.96□□□□□ -0.01
CXCR4P61073 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.96□□□□□ -0.01
CXCR4P61073 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CXCR4P61073 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.01
CXCR4P61073 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CXCR4P61073 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
CXCR4P61073 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC14.96□□□□□ -0.01
CXCR4P61073 GRK6P1-201ENST00000400595 1711 ntBASIC14.96□□□□□ -0.01
CXCR4P61073 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CXCR4P61073 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC14.96□□□□□ -0.01
CXCR4P61073 THAP5-204ENST00000438865 868 ntTSL 2 BASIC14.96□□□□□ -0.01
CXCR4P61073 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CXCR4P61073 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC14.96□□□□□ -0.01
CXCR4P61073 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.96□□□□□ -0.01
CXCR4P61073 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
CXCR4P61073 IL11-204ENST00000590625 1028 ntTSL 2 BASIC14.96□□□□□ -0.01
CXCR4P61073 AC087481.3-201ENST00000602886 1894 ntBASIC14.96□□□□□ -0.01
CXCR4P61073 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC14.96□□□□□ -0.01
CXCR4P61073 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC14.96□□□□□ -0.01
CXCR4P61073 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC14.96□□□□□ -0.02
CXCR4P61073 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.96□□□□□ -0.02
CXCR4P61073 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CXCR4P61073 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
CXCR4P61073 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
CXCR4P61073 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
CXCR4P61073 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.96□□□□□ -0.02
CXCR4P61073 AC005089.1-201ENST00000619486 2241 ntBASIC14.96□□□□□ -0.02
CXCR4P61073 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
CXCR4P61073 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.96□□□□□ -0.02
CXCR4P61073 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.96□□□□□ -0.02
CXCR4P61073 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CXCR4P61073 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
CXCR4P61073 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CXCR4P61073 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CXCR4P61073 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CXCR4P61073 AC023908.3-201ENST00000564211 3047 ntBASIC14.95□□□□□ -0.02
CXCR4P61073 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CXCR4P61073 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CXCR4P61073 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.95□□□□□ -0.02
CXCR4P61073 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CXCR4P61073 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CXCR4P61073 AL590787.1-201ENST00000568856 1315 ntBASIC14.95□□□□□ -0.02
CXCR4P61073 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CXCR4P61073 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC14.95□□□□□ -0.02
CXCR4P61073 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.95□□□□□ -0.02
CXCR4P61073 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
CXCR4P61073 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CXCR4P61073 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC14.95□□□□□ -0.02
CXCR4P61073 AC008677.1-201ENST00000519230 1561 ntBASIC14.95□□□□□ -0.02
CXCR4P61073 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
CXCR4P61073 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.95□□□□□ -0.02
CXCR4P61073 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CXCR4P61073 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CXCR4P61073 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CXCR4P61073 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.95□□□□□ -0.02
CXCR4P61073 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CXCR4P61073 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CXCR4P61073 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CXCR4P61073 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CXCR4P61073 POM121L3P-201ENST00000419331 1163 ntBASIC14.95□□□□□ -0.02
CXCR4P61073 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC14.95□□□□□ -0.02
CXCR4P61073 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC14.95□□□□□ -0.02
CXCR4P61073 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC14.95□□□□□ -0.02
CXCR4P61073 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC14.95□□□□□ -0.02
CXCR4P61073 AC020765.3-201ENST00000613051 740 ntBASIC14.95□□□□□ -0.02
CXCR4P61073 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
CXCR4P61073 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CXCR4P61073 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.95□□□□□ -0.02
CXCR4P61073 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.95□□□□□ -0.02
CXCR4P61073 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
CXCR4P61073 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.95□□□□□ -0.02
CXCR4P61073 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.95□□□□□ -0.02
CXCR4P61073 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
CXCR4P61073 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CXCR4P61073 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CXCR4P61073 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CXCR4P61073 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.95□□□□□ -0.02
CXCR4P61073 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.95□□□□□ -0.02
CXCR4P61073 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CXCR4P61073 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.95□□□□□ -0.02
CXCR4P61073 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CXCR4P61073 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
CXCR4P61073 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
CXCR4P61073 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CXCR4P61073 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CXCR4P61073 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CXCR4P61073 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CXCR4P61073 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14.95□□□□□ -0.02
CXCR4P61073 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms