Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
CHMP4BP1P59074 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC18.74■□□□□ 0.59
CHMP4BP1P59074 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CHMP4BP1P59074 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
CHMP4BP1P59074 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
CHMP4BP1P59074 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC18.74■□□□□ 0.59
CHMP4BP1P59074 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHMP4BP1P59074 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CHMP4BP1P59074 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
CHMP4BP1P59074 AC016027.1-202ENST00000607927 1699 ntBASIC18.74■□□□□ 0.59
CHMP4BP1P59074 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CHMP4BP1P59074 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHMP4BP1P59074 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
CHMP4BP1P59074 AC236430.1-201ENST00000402231 743 ntBASIC18.74■□□□□ 0.59
CHMP4BP1P59074 HCG4-201ENST00000418983 998 ntBASIC18.74■□□□□ 0.59
CHMP4BP1P59074 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC18.74■□□□□ 0.59
CHMP4BP1P59074 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC18.74■□□□□ 0.59
CHMP4BP1P59074 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC18.74■□□□□ 0.59
CHMP4BP1P59074 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CHMP4BP1P59074 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC18.74■□□□□ 0.59
CHMP4BP1P59074 AL512638.1-201ENST00000457493 794 ntBASIC18.74■□□□□ 0.59
CHMP4BP1P59074 MTRF1LP2-201ENST00000506027 1122 ntBASIC18.74■□□□□ 0.59
CHMP4BP1P59074 AC087641.1-201ENST00000557561 1021 ntBASIC18.74■□□□□ 0.59
CHMP4BP1P59074 AC027307.2-201ENST00000591252 911 ntBASIC18.74■□□□□ 0.59
CHMP4BP1P59074 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHMP4BP1P59074 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CHMP4BP1P59074 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHMP4BP1P59074 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHMP4BP1P59074 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC18.74■□□□□ 0.59
CHMP4BP1P59074 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
CHMP4BP1P59074 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC18.74■□□□□ 0.59
CHMP4BP1P59074 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CHMP4BP1P59074 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHMP4BP1P59074 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CHMP4BP1P59074 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CHMP4BP1P59074 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CHMP4BP1P59074 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC18.74■□□□□ 0.59
CHMP4BP1P59074 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHMP4BP1P59074 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC18.73■□□□□ 0.59
CHMP4BP1P59074 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHMP4BP1P59074 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.73■□□□□ 0.59
CHMP4BP1P59074 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CHMP4BP1P59074 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CHMP4BP1P59074 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHMP4BP1P59074 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHMP4BP1P59074 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CHMP4BP1P59074 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CHMP4BP1P59074 TOP3BP1-201ENST00000420768 1380 ntBASIC18.73■□□□□ 0.59
CHMP4BP1P59074 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHMP4BP1P59074 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CHMP4BP1P59074 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHMP4BP1P59074 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CHMP4BP1P59074 RNU1-129P-201ENST00000384064 167 ntBASIC18.73■□□□□ 0.59
CHMP4BP1P59074 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CHMP4BP1P59074 CDK2AP2P3-201ENST00000422476 372 ntBASIC18.73■□□□□ 0.59
CHMP4BP1P59074 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC18.73■□□□□ 0.59
CHMP4BP1P59074 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC18.73■□□□□ 0.59
CHMP4BP1P59074 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CHMP4BP1P59074 LINC01225-203ENST00000563550 1244 ntBASIC18.73■□□□□ 0.59
CHMP4BP1P59074 U1.21-201ENST00000580816 167 ntBASIC18.73■□□□□ 0.59
CHMP4BP1P59074 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CHMP4BP1P59074 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
CHMP4BP1P59074 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CHMP4BP1P59074 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC18.73■□□□□ 0.59
CHMP4BP1P59074 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CHMP4BP1P59074 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHMP4BP1P59074 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CHMP4BP1P59074 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CHMP4BP1P59074 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHMP4BP1P59074 AC016396.2-201ENST00000562575 1417 ntBASIC18.73■□□□□ 0.59
CHMP4BP1P59074 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC18.73■□□□□ 0.59
CHMP4BP1P59074 AC116353.5-201ENST00000638148 1699 ntBASIC18.73■□□□□ 0.59
CHMP4BP1P59074 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CHMP4BP1P59074 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CHMP4BP1P59074 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
CHMP4BP1P59074 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHMP4BP1P59074 RHBDF1P1-201ENST00000427504 1941 ntBASIC18.72■□□□□ 0.59
CHMP4BP1P59074 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
CHMP4BP1P59074 FOS-208ENST00000555686 1496 ntTSL 2 BASIC18.72■□□□□ 0.59
CHMP4BP1P59074 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHMP4BP1P59074 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC18.72■□□□□ 0.59
CHMP4BP1P59074 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHMP4BP1P59074 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHMP4BP1P59074 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHMP4BP1P59074 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHMP4BP1P59074 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC18.72■□□□□ 0.59
CHMP4BP1P59074 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHMP4BP1P59074 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHMP4BP1P59074 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CHMP4BP1P59074 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHMP4BP1P59074 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC18.72■□□□□ 0.59
CHMP4BP1P59074 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHMP4BP1P59074 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHMP4BP1P59074 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHMP4BP1P59074 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC18.72■□□□□ 0.59
CHMP4BP1P59074 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CHMP4BP1P59074 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
CHMP4BP1P59074 PNKD-204ENST00000436005 978 ntTSL 5 BASIC18.72■□□□□ 0.59
CHMP4BP1P59074 SPDYE14P-201ENST00000442619 822 ntBASIC18.72■□□□□ 0.59
CHMP4BP1P59074 TSPY16P-201ENST00000449843 468 ntBASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms