Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.69■□□□□ 0.1
VSX2P58304 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.69■□□□□ 0.1
VSX2P58304 AC142381.1-201ENST00000426099 345 ntBASIC15.69■□□□□ 0.1
VSX2P58304 GPS2P2-201ENST00000430745 888 ntBASIC15.69■□□□□ 0.1
VSX2P58304 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC15.69■□□□□ 0.1
VSX2P58304 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC15.69■□□□□ 0.1
VSX2P58304 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
VSX2P58304 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC15.69■□□□□ 0.1
VSX2P58304 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC15.69■□□□□ 0.1
VSX2P58304 AC025678.2-201ENST00000562061 970 ntBASIC15.69■□□□□ 0.1
VSX2P58304 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VSX2P58304 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.69■□□□□ 0.1
VSX2P58304 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.69■□□□□ 0.1
VSX2P58304 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VSX2P58304 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC15.69■□□□□ 0.1
VSX2P58304 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC15.69■□□□□ 0.1
VSX2P58304 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VSX2P58304 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
VSX2P58304 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC15.69■□□□□ 0.1
VSX2P58304 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VSX2P58304 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
VSX2P58304 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
VSX2P58304 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
VSX2P58304 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VSX2P58304 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
VSX2P58304 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC15.69■□□□□ 0.1
VSX2P58304 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VSX2P58304 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VSX2P58304 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
VSX2P58304 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
VSX2P58304 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
VSX2P58304 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.68■□□□□ 0.1
VSX2P58304 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15.68■□□□□ 0.1
VSX2P58304 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
VSX2P58304 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
VSX2P58304 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VSX2P58304 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VSX2P58304 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
VSX2P58304 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
VSX2P58304 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
VSX2P58304 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
VSX2P58304 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VSX2P58304 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VSX2P58304 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
VSX2P58304 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
VSX2P58304 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VSX2P58304 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VSX2P58304 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
VSX2P58304 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VSX2P58304 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC15.68■□□□□ 0.1
VSX2P58304 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.68■□□□□ 0.1
VSX2P58304 ALG1L8P-201ENST00000533887 760 ntBASIC15.68■□□□□ 0.1
VSX2P58304 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VSX2P58304 SPTSSB-204ENST00000617024 1292 ntBASIC15.68■□□□□ 0.1
VSX2P58304 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
VSX2P58304 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
VSX2P58304 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VSX2P58304 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VSX2P58304 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
VSX2P58304 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
VSX2P58304 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.68■□□□□ 0.1
VSX2P58304 LINC01144-201ENST00000626198 1710 ntBASIC15.68■□□□□ 0.1
VSX2P58304 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VSX2P58304 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VSX2P58304 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.68■□□□□ 0.1
VSX2P58304 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VSX2P58304 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
VSX2P58304 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
VSX2P58304 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
VSX2P58304 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VSX2P58304 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
VSX2P58304 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC15.67■□□□□ 0.1
VSX2P58304 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
VSX2P58304 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.67■□□□□ 0.1
VSX2P58304 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.67■□□□□ 0.1
VSX2P58304 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
VSX2P58304 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
VSX2P58304 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.67■□□□□ 0.1
VSX2P58304 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VSX2P58304 AL596257.1-201ENST00000641463 2694 ntBASIC15.67■□□□□ 0.1
VSX2P58304 ALOX12P2-203ENST00000570921 1945 ntBASIC15.67■□□□□ 0.1
VSX2P58304 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
VSX2P58304 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
VSX2P58304 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC15.67■□□□□ 0.1
VSX2P58304 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VSX2P58304 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VSX2P58304 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
VSX2P58304 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VSX2P58304 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
VSX2P58304 AL645939.2-201ENST00000427340 991 ntBASIC15.67■□□□□ 0.1
VSX2P58304 AC093724.1-201ENST00000448659 1027 ntBASIC15.67■□□□□ 0.1
VSX2P58304 AC026150.2-201ENST00000564693 1156 ntBASIC15.67■□□□□ 0.1
VSX2P58304 LSM12-202ENST00000585388 942 ntTSL 3 BASIC15.67■□□□□ 0.1
VSX2P58304 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VSX2P58304 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC15.67■□□□□ 0.1
VSX2P58304 RAB34-224ENST00000636513 888 ntTSL 5 BASIC15.67■□□□□ 0.1
VSX2P58304 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
VSX2P58304 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
VSX2P58304 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
VSX2P58304 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms