Protein–RNA interactions for Protein: P56696

KCNQ4, Potassium voltage-gated channel subfamily KQT member 4, humanhuman

Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ4P56696 DERL2-202ENST00000570848 657 ntTSL 5 BASIC20.59■□□□□ 0.89
KCNQ4P56696 AC124283.3-201ENST00000570869 594 ntBASIC20.59■□□□□ 0.89
KCNQ4P56696 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
KCNQ4P56696 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC20.59■□□□□ 0.89
KCNQ4P56696 ABBA01031663.1-201ENST00000635630 790 ntBASIC20.59■□□□□ 0.89
KCNQ4P56696 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
KCNQ4P56696 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
KCNQ4P56696 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
KCNQ4P56696 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC20.59■□□□□ 0.89
KCNQ4P56696 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
KCNQ4P56696 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
KCNQ4P56696 AC006538.1-201ENST00000567905 1585 ntBASIC20.59■□□□□ 0.89
KCNQ4P56696 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
KCNQ4P56696 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
KCNQ4P56696 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
KCNQ4P56696 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
KCNQ4P56696 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
KCNQ4P56696 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
KCNQ4P56696 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
KCNQ4P56696 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
KCNQ4P56696 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC20.58■□□□□ 0.89
KCNQ4P56696 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
KCNQ4P56696 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
KCNQ4P56696 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.58■□□□□ 0.89
KCNQ4P56696 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC20.58■□□□□ 0.89
KCNQ4P56696 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC20.58■□□□□ 0.89
KCNQ4P56696 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC20.58■□□□□ 0.89
KCNQ4P56696 IGHJ2P-201ENST00000454480 60 ntBASIC20.58■□□□□ 0.89
KCNQ4P56696 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC20.58■□□□□ 0.89
KCNQ4P56696 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
KCNQ4P56696 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC20.58■□□□□ 0.89
KCNQ4P56696 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC20.58■□□□□ 0.89
KCNQ4P56696 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC20.58■□□□□ 0.89
KCNQ4P56696 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
KCNQ4P56696 AL139011.1-202ENST00000642063 584 ntBASIC20.58■□□□□ 0.89
KCNQ4P56696 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
KCNQ4P56696 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
KCNQ4P56696 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
KCNQ4P56696 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
KCNQ4P56696 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
KCNQ4P56696 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
KCNQ4P56696 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
KCNQ4P56696 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KCNQ4P56696 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC20.57■□□□□ 0.88
KCNQ4P56696 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KCNQ4P56696 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
KCNQ4P56696 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KCNQ4P56696 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
KCNQ4P56696 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
KCNQ4P56696 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
KCNQ4P56696 AC009053.2-201ENST00000563701 2365 ntBASIC20.57■□□□□ 0.88
KCNQ4P56696 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC20.57■□□□□ 0.88
KCNQ4P56696 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KCNQ4P56696 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
KCNQ4P56696 MIR326-201ENST00000362220 95 ntBASIC20.57■□□□□ 0.88
KCNQ4P56696 YBX1P6-201ENST00000442962 1002 ntBASIC20.57■□□□□ 0.88
KCNQ4P56696 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KCNQ4P56696 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC20.57■□□□□ 0.88
KCNQ4P56696 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
KCNQ4P56696 RNF165-205ENST00000588679 2904 ntBASIC20.57■□□□□ 0.88
KCNQ4P56696 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
KCNQ4P56696 AL049840.4-201ENST00000602422 811 ntBASIC20.57■□□□□ 0.88
KCNQ4P56696 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC20.57■□□□□ 0.88
KCNQ4P56696 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
KCNQ4P56696 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
KCNQ4P56696 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC20.57■□□□□ 0.88
KCNQ4P56696 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
KCNQ4P56696 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
KCNQ4P56696 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
KCNQ4P56696 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
KCNQ4P56696 HTR7P1-202ENST00000624664 4411 ntBASIC20.56■□□□□ 0.88
KCNQ4P56696 AL603756.1-201ENST00000606511 2163 ntBASIC20.56■□□□□ 0.88
KCNQ4P56696 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC20.56■□□□□ 0.88
KCNQ4P56696 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
KCNQ4P56696 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC20.56■□□□□ 0.88
KCNQ4P56696 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
KCNQ4P56696 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
KCNQ4P56696 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
KCNQ4P56696 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
KCNQ4P56696 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC20.56■□□□□ 0.88
KCNQ4P56696 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
KCNQ4P56696 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
KCNQ4P56696 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
KCNQ4P56696 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
KCNQ4P56696 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC20.56■□□□□ 0.88
KCNQ4P56696 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC20.56■□□□□ 0.88
KCNQ4P56696 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC20.56■□□□□ 0.88
KCNQ4P56696 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC20.56■□□□□ 0.88
KCNQ4P56696 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
KCNQ4P56696 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC20.56■□□□□ 0.88
KCNQ4P56696 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
KCNQ4P56696 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC20.56■□□□□ 0.88
KCNQ4P56696 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC20.56■□□□□ 0.88
KCNQ4P56696 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
KCNQ4P56696 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC20.56■□□□□ 0.88
KCNQ4P56696 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
KCNQ4P56696 GRN-214ENST00000589265 1632 ntTSL 5 BASIC20.56■□□□□ 0.88
KCNQ4P56696 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
KCNQ4P56696 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
KCNQ4P56696 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms