Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDH4P55283 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.68■□□□□ 0.26
CDH4P55283 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.68■□□□□ 0.26
CDH4P55283 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDH4P55283 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
CDH4P55283 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.68■□□□□ 0.26
CDH4P55283 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.68■□□□□ 0.26
CDH4P55283 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDH4P55283 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.68■□□□□ 0.26
CDH4P55283 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDH4P55283 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.68■□□□□ 0.26
CDH4P55283 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
CDH4P55283 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDH4P55283 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.68■□□□□ 0.26
CDH4P55283 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CDH4P55283 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.68■□□□□ 0.26
CDH4P55283 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC16.68■□□□□ 0.26
CDH4P55283 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.68■□□□□ 0.26
CDH4P55283 AC105021.1-202ENST00000570572 669 ntBASIC16.68■□□□□ 0.26
CDH4P55283 LITAF-210ENST00000571976 548 ntTSL 2 BASIC16.68■□□□□ 0.26
CDH4P55283 LITAF-214ENST00000574703 486 ntTSL 2 BASIC16.68■□□□□ 0.26
CDH4P55283 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.68■□□□□ 0.26
CDH4P55283 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDH4P55283 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.68■□□□□ 0.26
CDH4P55283 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CDH4P55283 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDH4P55283 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDH4P55283 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CDH4P55283 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDH4P55283 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.68■□□□□ 0.26
CDH4P55283 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDH4P55283 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDH4P55283 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16.68■□□□□ 0.26
CDH4P55283 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CDH4P55283 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CDH4P55283 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CDH4P55283 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.68■□□□□ 0.26
CDH4P55283 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDH4P55283 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.68■□□□□ 0.26
CDH4P55283 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDH4P55283 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDH4P55283 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDH4P55283 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CDH4P55283 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.68■□□□□ 0.26
CDH4P55283 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDH4P55283 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDH4P55283 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDH4P55283 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDH4P55283 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.67■□□□□ 0.26
CDH4P55283 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.67■□□□□ 0.26
CDH4P55283 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDH4P55283 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
CDH4P55283 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDH4P55283 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.67■□□□□ 0.26
CDH4P55283 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDH4P55283 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDH4P55283 AC245100.5-201ENST00000452108 331 ntBASIC16.67■□□□□ 0.26
CDH4P55283 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDH4P55283 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDH4P55283 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.67■□□□□ 0.26
CDH4P55283 NAA38-207ENST00000576861 556 ntTSL 3 BASIC16.67■□□□□ 0.26
CDH4P55283 AC026979.3-201ENST00000607315 403 ntBASIC16.67■□□□□ 0.26
CDH4P55283 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CDH4P55283 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDH4P55283 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDH4P55283 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.67■□□□□ 0.26
CDH4P55283 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDH4P55283 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.67■□□□□ 0.26
CDH4P55283 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.67■□□□□ 0.26
CDH4P55283 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.67■□□□□ 0.26
CDH4P55283 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDH4P55283 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDH4P55283 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH4P55283 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.66■□□□□ 0.26
CDH4P55283 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.66■□□□□ 0.26
CDH4P55283 AC006449.6-201ENST00000612330 2296 ntBASIC16.66■□□□□ 0.26
CDH4P55283 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.66■□□□□ 0.26
CDH4P55283 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH4P55283 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH4P55283 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
CDH4P55283 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH4P55283 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDH4P55283 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.66■□□□□ 0.26
CDH4P55283 AC069120.2-201ENST00000524091 540 ntBASIC16.66■□□□□ 0.26
CDH4P55283 BANF1P1-201ENST00000553684 263 ntBASIC16.66■□□□□ 0.26
CDH4P55283 DUX4L27-201ENST00000554796 1261 ntBASIC16.66■□□□□ 0.26
CDH4P55283 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.66■□□□□ 0.26
CDH4P55283 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.66■□□□□ 0.26
CDH4P55283 RN7SL828P-201ENST00000607615 303 ntBASIC16.66■□□□□ 0.26
CDH4P55283 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CDH4P55283 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDH4P55283 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CDH4P55283 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDH4P55283 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH4P55283 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CDH4P55283 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CDH4P55283 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH4P55283 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
CDH4P55283 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.66■□□□□ 0.26
CDH4P55283 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 171.2 ms