Protein–RNA interactions for Protein: P52657

GTF2A2, Transcription initiation factor IIA subunit 2, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A2P52657 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
GTF2A2P52657 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GTF2A2P52657 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GTF2A2P52657 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
GTF2A2P52657 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
GTF2A2P52657 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GTF2A2P52657 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC18.66■□□□□ 0.58
GTF2A2P52657 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
GTF2A2P52657 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC18.66■□□□□ 0.58
GTF2A2P52657 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GTF2A2P52657 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GTF2A2P52657 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
GTF2A2P52657 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GTF2A2P52657 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
GTF2A2P52657 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GTF2A2P52657 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GTF2A2P52657 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GTF2A2P52657 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC18.66■□□□□ 0.58
GTF2A2P52657 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
GTF2A2P52657 PFN1P12-201ENST00000455938 534 ntBASIC18.66■□□□□ 0.58
GTF2A2P52657 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GTF2A2P52657 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GTF2A2P52657 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC18.66■□□□□ 0.58
GTF2A2P52657 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC18.66■□□□□ 0.58
GTF2A2P52657 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC18.66■□□□□ 0.58
GTF2A2P52657 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC18.66■□□□□ 0.58
GTF2A2P52657 AL359711.2-201ENST00000563105 872 ntBASIC18.66■□□□□ 0.58
GTF2A2P52657 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC18.66■□□□□ 0.58
GTF2A2P52657 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC18.66■□□□□ 0.58
GTF2A2P52657 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC18.66■□□□□ 0.58
GTF2A2P52657 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GTF2A2P52657 BRI3BPP1-201ENST00000594224 787 ntBASIC18.66■□□□□ 0.58
GTF2A2P52657 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC18.66■□□□□ 0.58
GTF2A2P52657 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GTF2A2P52657 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
GTF2A2P52657 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GTF2A2P52657 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC18.66■□□□□ 0.58
GTF2A2P52657 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GTF2A2P52657 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GTF2A2P52657 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.66■□□□□ 0.58
GTF2A2P52657 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
GTF2A2P52657 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GTF2A2P52657 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GTF2A2P52657 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GTF2A2P52657 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
GTF2A2P52657 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.65■□□□□ 0.58
GTF2A2P52657 AMT-232ENST00000636199 1546 ntTSL 5 BASIC18.65■□□□□ 0.58
GTF2A2P52657 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GTF2A2P52657 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GTF2A2P52657 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
GTF2A2P52657 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
GTF2A2P52657 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GTF2A2P52657 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
GTF2A2P52657 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GTF2A2P52657 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
GTF2A2P52657 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
GTF2A2P52657 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GTF2A2P52657 RPL28-203ENST00000428193 573 ntTSL 2 BASIC18.65■□□□□ 0.58
GTF2A2P52657 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GTF2A2P52657 RPL13P2-201ENST00000440687 659 ntBASIC18.65■□□□□ 0.58
GTF2A2P52657 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC18.65■□□□□ 0.58
GTF2A2P52657 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
GTF2A2P52657 FAM86LP-201ENST00000478302 853 ntBASIC18.65■□□□□ 0.58
GTF2A2P52657 AC108725.1-201ENST00000495472 409 ntBASIC18.65■□□□□ 0.58
GTF2A2P52657 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC18.65■□□□□ 0.58
GTF2A2P52657 AP000812.2-201ENST00000538934 718 ntBASIC18.65■□□□□ 0.58
GTF2A2P52657 RPL28-207ENST00000558815 616 ntTSL 2 BASIC18.65■□□□□ 0.58
GTF2A2P52657 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC18.65■□□□□ 0.58
GTF2A2P52657 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC18.65■□□□□ 0.58
GTF2A2P52657 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
GTF2A2P52657 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC18.65■□□□□ 0.58
GTF2A2P52657 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
GTF2A2P52657 AC005622.1-201ENST00000636801 1703 ntBASIC18.65■□□□□ 0.58
GTF2A2P52657 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
GTF2A2P52657 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
GTF2A2P52657 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.65■□□□□ 0.58
GTF2A2P52657 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
GTF2A2P52657 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
GTF2A2P52657 PCGF3-213ENST00000620529 1899 ntBASIC18.65■□□□□ 0.58
GTF2A2P52657 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
GTF2A2P52657 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
GTF2A2P52657 FZD10-202ENST00000539839 3282 ntBASIC18.64■□□□□ 0.58
GTF2A2P52657 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.64■□□□□ 0.58
GTF2A2P52657 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
GTF2A2P52657 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GTF2A2P52657 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.64■□□□□ 0.57
GTF2A2P52657 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
GTF2A2P52657 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
GTF2A2P52657 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
GTF2A2P52657 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC18.64■□□□□ 0.57
GTF2A2P52657 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC18.64■□□□□ 0.57
GTF2A2P52657 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.64■□□□□ 0.57
GTF2A2P52657 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
GTF2A2P52657 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
GTF2A2P52657 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
GTF2A2P52657 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
GTF2A2P52657 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC18.64■□□□□ 0.57
GTF2A2P52657 PKIG-203ENST00000372887 769 ntTSL 3 BASIC18.64■□□□□ 0.57
GTF2A2P52657 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
GTF2A2P52657 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms