Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC14.16□□□□□ -0.14
HCFC1P51610 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC14.16□□□□□ -0.14
HCFC1P51610 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HCFC1P51610 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC14.16□□□□□ -0.14
HCFC1P51610 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HCFC1P51610 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
HCFC1P51610 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
HCFC1P51610 AL031731.1-201ENST00000642131 2094 ntBASIC14.16□□□□□ -0.14
HCFC1P51610 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
HCFC1P51610 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
HCFC1P51610 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
HCFC1P51610 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HCFC1P51610 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HCFC1P51610 ANKRD19P-201ENST00000338192 862 ntBASIC14.15□□□□□ -0.14
HCFC1P51610 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
HCFC1P51610 MPV17-208ENST00000405076 603 ntTSL 5 BASIC14.15□□□□□ -0.14
HCFC1P51610 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC14.15□□□□□ -0.14
HCFC1P51610 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
HCFC1P51610 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
HCFC1P51610 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
HCFC1P51610 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
HCFC1P51610 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.15□□□□□ -0.14
HCFC1P51610 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
HCFC1P51610 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HCFC1P51610 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
HCFC1P51610 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
HCFC1P51610 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
HCFC1P51610 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC14.15□□□□□ -0.14
HCFC1P51610 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HCFC1P51610 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC14.15□□□□□ -0.14
HCFC1P51610 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HCFC1P51610 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
HCFC1P51610 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HCFC1P51610 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HCFC1P51610 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC14.15□□□□□ -0.14
HCFC1P51610 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
HCFC1P51610 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HCFC1P51610 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
HCFC1P51610 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HCFC1P51610 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HCFC1P51610 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HCFC1P51610 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.15□□□□□ -0.14
HCFC1P51610 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC14.15□□□□□ -0.14
HCFC1P51610 RN7SL752P-201ENST00000463779 287 ntBASIC14.15□□□□□ -0.14
HCFC1P51610 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
HCFC1P51610 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.15□□□□□ -0.14
HCFC1P51610 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC14.15□□□□□ -0.14
HCFC1P51610 AL391069.4-201ENST00000609583 481 ntBASIC14.15□□□□□ -0.14
HCFC1P51610 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HCFC1P51610 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HCFC1P51610 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
HCFC1P51610 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
HCFC1P51610 PCDHB19P-201ENST00000570871 2371 ntBASIC14.15□□□□□ -0.14
HCFC1P51610 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC14.15□□□□□ -0.15
HCFC1P51610 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC14.15□□□□□ -0.15
HCFC1P51610 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC14.15□□□□□ -0.15
HCFC1P51610 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC14.15□□□□□ -0.15
HCFC1P51610 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
HCFC1P51610 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HCFC1P51610 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HCFC1P51610 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
HCFC1P51610 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC14.14□□□□□ -0.15
HCFC1P51610 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
HCFC1P51610 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HCFC1P51610 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
HCFC1P51610 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC14.14□□□□□ -0.15
HCFC1P51610 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HCFC1P51610 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14.14□□□□□ -0.15
HCFC1P51610 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.14□□□□□ -0.15
HCFC1P51610 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC14.14□□□□□ -0.15
HCFC1P51610 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC14.14□□□□□ -0.15
HCFC1P51610 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HCFC1P51610 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC14.14□□□□□ -0.15
HCFC1P51610 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
HCFC1P51610 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC14.14□□□□□ -0.15
HCFC1P51610 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC14.14□□□□□ -0.15
HCFC1P51610 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.14□□□□□ -0.15
HCFC1P51610 AL365330.1-201ENST00000607459 531 ntBASIC14.14□□□□□ -0.15
HCFC1P51610 AC020765.3-201ENST00000613051 740 ntBASIC14.14□□□□□ -0.15
HCFC1P51610 MIR6775-201ENST00000617557 69 ntBASIC14.14□□□□□ -0.15
HCFC1P51610 WNT11-204ENST00000621122 789 ntTSL 5 BASIC14.14□□□□□ -0.15
HCFC1P51610 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
HCFC1P51610 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HCFC1P51610 AC005915.1-201ENST00000624912 2018 ntBASIC14.14□□□□□ -0.15
HCFC1P51610 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HCFC1P51610 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HCFC1P51610 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HCFC1P51610 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
HCFC1P51610 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
HCFC1P51610 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HCFC1P51610 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HCFC1P51610 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC14.14□□□□□ -0.15
HCFC1P51610 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HCFC1P51610 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.14□□□□□ -0.15
HCFC1P51610 GPAA1P2-202ENST00000606848 1787 ntBASIC14.14□□□□□ -0.15
HCFC1P51610 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HCFC1P51610 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC14.14□□□□□ -0.15
HCFC1P51610 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HCFC1P51610 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
HCFC1P51610 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms