Protein–RNA interactions for Protein: P51571

SSR4, Translocon-associated protein subunit delta, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P51571 RN7SL828P-201ENST00000607615 303 ntBASIC14.98□□□□□ -0.01
SSR4P51571 AL589739.1-201ENST00000607720 493 ntBASIC14.98□□□□□ -0.01
SSR4P51571 SPDYE12P-201ENST00000618416 771 ntBASIC14.98□□□□□ -0.01
SSR4P51571 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC14.98□□□□□ -0.01
SSR4P51571 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SSR4P51571 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SSR4P51571 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.98□□□□□ -0.01
SSR4P51571 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
SSR4P51571 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
SSR4P51571 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SSR4P51571 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SSR4P51571 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SSR4P51571 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC14.97□□□□□ -0.01
SSR4P51571 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC14.97□□□□□ -0.01
SSR4P51571 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
SSR4P51571 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSR4P51571 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC14.97□□□□□ -0.01
SSR4P51571 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.97□□□□□ -0.01
SSR4P51571 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
SSR4P51571 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
SSR4P51571 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
SSR4P51571 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
SSR4P51571 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSR4P51571 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.97□□□□□ -0.01
SSR4P51571 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
SSR4P51571 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSR4P51571 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSR4P51571 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSR4P51571 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSR4P51571 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SSR4P51571 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSR4P51571 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SSR4P51571 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SSR4P51571 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSR4P51571 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
SSR4P51571 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSR4P51571 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSR4P51571 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
SSR4P51571 AC092580.3-201ENST00000430932 139 ntBASIC14.97□□□□□ -0.01
SSR4P51571 AC241585.1-201ENST00000433527 519 ntBASIC14.97□□□□□ -0.01
SSR4P51571 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.97□□□□□ -0.01
SSR4P51571 HLA-V-204ENST00000476601 1289 ntBASIC14.97□□□□□ -0.01
SSR4P51571 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
SSR4P51571 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC14.97□□□□□ -0.01
SSR4P51571 INO80C-206ENST00000586489 594 ntTSL 3 BASIC14.97□□□□□ -0.01
SSR4P51571 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC14.97□□□□□ -0.01
SSR4P51571 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.97□□□□□ -0.01
SSR4P51571 AJ011932.1-201ENST00000621707 465 ntBASIC14.97□□□□□ -0.01
SSR4P51571 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.97□□□□□ -0.01
SSR4P51571 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.97□□□□□ -0.01
SSR4P51571 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SSR4P51571 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC14.97□□□□□ -0.01
SSR4P51571 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSR4P51571 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSR4P51571 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSR4P51571 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
SSR4P51571 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSR4P51571 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SSR4P51571 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
SSR4P51571 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.97□□□□□ -0.01
SSR4P51571 OS9-205ENST00000413095 1660 ntTSL 2 BASIC14.97□□□□□ -0.01
SSR4P51571 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSR4P51571 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SSR4P51571 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SSR4P51571 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
SSR4P51571 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SSR4P51571 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SSR4P51571 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
SSR4P51571 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
SSR4P51571 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SSR4P51571 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC14.96□□□□□ -0.01
SSR4P51571 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SSR4P51571 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
SSR4P51571 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC14.96□□□□□ -0.01
SSR4P51571 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
SSR4P51571 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SSR4P51571 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SSR4P51571 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SSR4P51571 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
SSR4P51571 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.96□□□□□ -0.01
SSR4P51571 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SSR4P51571 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SSR4P51571 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SSR4P51571 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SSR4P51571 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
SSR4P51571 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
SSR4P51571 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC14.96□□□□□ -0.01
SSR4P51571 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
SSR4P51571 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SSR4P51571 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC14.96□□□□□ -0.01
SSR4P51571 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
SSR4P51571 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.96□□□□□ -0.01
SSR4P51571 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.96□□□□□ -0.01
SSR4P51571 NAA60-208ENST00000570819 833 ntTSL 2 BASIC14.96□□□□□ -0.01
SSR4P51571 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC14.96□□□□□ -0.01
SSR4P51571 AL138828.2-201ENST00000615812 383 ntBASIC14.96□□□□□ -0.01
SSR4P51571 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SSR4P51571 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
SSR4P51571 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SSR4P51571 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms