Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC18.14■□□□□ 0.49
CENPFP49454 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
CENPFP49454 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
CENPFP49454 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CENPFP49454 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CENPFP49454 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC18.14■□□□□ 0.49
CENPFP49454 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.14■□□□□ 0.49
CENPFP49454 AC068880.1-201ENST00000507289 2297 ntBASIC18.14■□□□□ 0.49
CENPFP49454 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC18.14■□□□□ 0.49
CENPFP49454 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CENPFP49454 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CENPFP49454 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC18.14■□□□□ 0.49
CENPFP49454 CSH2-202ENST00000345366 598 ntTSL 5 BASIC18.14■□□□□ 0.49
CENPFP49454 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CENPFP49454 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CENPFP49454 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC18.14■□□□□ 0.49
CENPFP49454 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CENPFP49454 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CENPFP49454 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CENPFP49454 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CENPFP49454 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CENPFP49454 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC18.14■□□□□ 0.49
CENPFP49454 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CENPFP49454 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.14■□□□□ 0.49
CENPFP49454 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CENPFP49454 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CENPFP49454 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
CENPFP49454 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CENPFP49454 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CENPFP49454 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CENPFP49454 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CENPFP49454 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
CENPFP49454 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC18.13■□□□□ 0.49
CENPFP49454 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CENPFP49454 AC079316.1-201ENST00000548397 411 ntBASIC18.13■□□□□ 0.49
CENPFP49454 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.13■□□□□ 0.49
CENPFP49454 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CENPFP49454 CYP4F24P-201ENST00000586049 1580 ntBASIC18.13■□□□□ 0.49
CENPFP49454 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CENPFP49454 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CENPFP49454 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CENPFP49454 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.13■□□□□ 0.49
CENPFP49454 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC18.13■□□□□ 0.49
CENPFP49454 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC18.13■□□□□ 0.49
CENPFP49454 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC18.13■□□□□ 0.49
CENPFP49454 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CENPFP49454 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CENPFP49454 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CENPFP49454 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.13■□□□□ 0.49
CENPFP49454 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
CENPFP49454 KLK3-211ENST00000597483 810 ntTSL 2 BASIC18.13■□□□□ 0.49
CENPFP49454 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CENPFP49454 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CENPFP49454 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CENPFP49454 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CENPFP49454 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CENPFP49454 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CENPFP49454 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CENPFP49454 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CENPFP49454 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CENPFP49454 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CENPFP49454 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CENPFP49454 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CENPFP49454 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC18.12■□□□□ 0.49
CENPFP49454 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC18.12■□□□□ 0.49
CENPFP49454 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC18.12■□□□□ 0.49
CENPFP49454 AC026979.3-201ENST00000607315 403 ntBASIC18.12■□□□□ 0.49
CENPFP49454 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CENPFP49454 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC18.12■□□□□ 0.49
CENPFP49454 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.12■□□□□ 0.49
CENPFP49454 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC18.12■□□□□ 0.49
CENPFP49454 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC18.12■□□□□ 0.49
CENPFP49454 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CENPFP49454 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC18.12■□□□□ 0.49
CENPFP49454 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC18.12■□□□□ 0.49
CENPFP49454 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CENPFP49454 UPF3AP2-201ENST00000457924 1132 ntBASIC18.12■□□□□ 0.49
CENPFP49454 ENPP7P5-201ENST00000541031 1031 ntBASIC18.12■□□□□ 0.49
CENPFP49454 U62317.3-201ENST00000608319 855 ntBASIC18.12■□□□□ 0.49
CENPFP49454 MIR7845-201ENST00000618396 99 ntBASIC18.12■□□□□ 0.49
CENPFP49454 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CENPFP49454 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CENPFP49454 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CENPFP49454 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC18.12■□□□□ 0.49
CENPFP49454 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CENPFP49454 RPS3-201ENST00000278572 907 ntTSL 3 BASIC18.11■□□□□ 0.49
CENPFP49454 AC106760.1-201ENST00000508690 800 ntBASIC18.11■□□□□ 0.49
CENPFP49454 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CENPFP49454 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC18.11■□□□□ 0.49
CENPFP49454 AL022328.3-201ENST00000607943 679 ntBASIC18.11■□□□□ 0.49
CENPFP49454 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC18.11■□□□□ 0.49
CENPFP49454 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CENPFP49454 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CENPFP49454 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC18.11■□□□□ 0.49
CENPFP49454 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CENPFP49454 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CENPFP49454 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC18.11■□□□□ 0.49
CENPFP49454 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC18.11■□□□□ 0.49
CENPFP49454 HIST2H2BC-201ENST00000498492 580 ntBASIC18.11■□□□□ 0.49
CENPFP49454 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms