Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC18.64■□□□□ 0.57
COPB2P35606 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC18.64■□□□□ 0.57
COPB2P35606 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
COPB2P35606 AC138969.3-201ENST00000546612 1459 ntBASIC18.64■□□□□ 0.57
COPB2P35606 AC138932.2-201ENST00000548268 1459 ntBASIC18.64■□□□□ 0.57
COPB2P35606 AC126755.4-201ENST00000549796 1459 ntBASIC18.64■□□□□ 0.57
COPB2P35606 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
COPB2P35606 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
COPB2P35606 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.57
COPB2P35606 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
COPB2P35606 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
COPB2P35606 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18.63■□□□□ 0.57
COPB2P35606 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COPB2P35606 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
COPB2P35606 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC18.63■□□□□ 0.57
COPB2P35606 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
COPB2P35606 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COPB2P35606 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COPB2P35606 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC18.63■□□□□ 0.57
COPB2P35606 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COPB2P35606 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
COPB2P35606 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COPB2P35606 OSM-203ENST00000403463 464 ntTSL 3 BASIC18.63■□□□□ 0.57
COPB2P35606 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
COPB2P35606 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC18.63■□□□□ 0.57
COPB2P35606 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
COPB2P35606 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC18.63■□□□□ 0.57
COPB2P35606 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC18.63■□□□□ 0.57
COPB2P35606 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
COPB2P35606 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
COPB2P35606 AC055876.2-201ENST00000531834 546 ntBASIC18.63■□□□□ 0.57
COPB2P35606 TEX48-202ENST00000612244 662 ntTSL 3 BASIC18.63■□□□□ 0.57
COPB2P35606 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
COPB2P35606 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COPB2P35606 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC18.63■□□□□ 0.57
COPB2P35606 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC18.63■□□□□ 0.57
COPB2P35606 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
COPB2P35606 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
COPB2P35606 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
COPB2P35606 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC18.63■□□□□ 0.57
COPB2P35606 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC18.63■□□□□ 0.57
COPB2P35606 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
COPB2P35606 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
COPB2P35606 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COPB2P35606 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC18.63■□□□□ 0.57
COPB2P35606 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
COPB2P35606 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
COPB2P35606 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
COPB2P35606 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
COPB2P35606 LINC01144-201ENST00000626198 1710 ntBASIC18.63■□□□□ 0.57
COPB2P35606 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
COPB2P35606 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COPB2P35606 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COPB2P35606 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COPB2P35606 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COPB2P35606 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
COPB2P35606 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.63■□□□□ 0.57
COPB2P35606 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.62■□□□□ 0.57
COPB2P35606 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
COPB2P35606 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COPB2P35606 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
COPB2P35606 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
COPB2P35606 SPDYE19P-201ENST00000338590 713 ntBASIC18.62■□□□□ 0.57
COPB2P35606 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC18.62■□□□□ 0.57
COPB2P35606 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
COPB2P35606 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC18.62■□□□□ 0.57
COPB2P35606 AP006294.1-201ENST00000415407 339 ntBASIC18.62■□□□□ 0.57
COPB2P35606 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC18.62■□□□□ 0.57
COPB2P35606 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC18.62■□□□□ 0.57
COPB2P35606 AL359881.2-201ENST00000602973 570 ntBASIC18.62■□□□□ 0.57
COPB2P35606 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.62■□□□□ 0.57
COPB2P35606 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC18.62■□□□□ 0.57
COPB2P35606 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
COPB2P35606 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COPB2P35606 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
COPB2P35606 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.62■□□□□ 0.57
COPB2P35606 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COPB2P35606 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COPB2P35606 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
COPB2P35606 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
COPB2P35606 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
COPB2P35606 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
COPB2P35606 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COPB2P35606 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
COPB2P35606 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
COPB2P35606 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
COPB2P35606 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
COPB2P35606 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COPB2P35606 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
COPB2P35606 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC18.61■□□□□ 0.57
COPB2P35606 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
COPB2P35606 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
COPB2P35606 PCGF3-213ENST00000620529 1899 ntBASIC18.61■□□□□ 0.57
COPB2P35606 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COPB2P35606 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
COPB2P35606 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC18.61■□□□□ 0.57
COPB2P35606 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC18.61■□□□□ 0.57
COPB2P35606 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
COPB2P35606 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COPB2P35606 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms