Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCK1P35558 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
PCK1P35558 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.31■□□□□ 0.36
PCK1P35558 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC17.31■□□□□ 0.36
PCK1P35558 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCK1P35558 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.31■□□□□ 0.36
PCK1P35558 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCK1P35558 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
PCK1P35558 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCK1P35558 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.3■□□□□ 0.36
PCK1P35558 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCK1P35558 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.3■□□□□ 0.36
PCK1P35558 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCK1P35558 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCK1P35558 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCK1P35558 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCK1P35558 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC17.3■□□□□ 0.36
PCK1P35558 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCK1P35558 AC026691.1-201ENST00000602502 2017 ntBASIC17.3■□□□□ 0.36
PCK1P35558 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
PCK1P35558 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC17.3■□□□□ 0.36
PCK1P35558 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.3■□□□□ 0.36
PCK1P35558 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCK1P35558 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
PCK1P35558 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCK1P35558 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.3■□□□□ 0.36
PCK1P35558 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
PCK1P35558 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
PCK1P35558 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.3■□□□□ 0.36
PCK1P35558 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.3■□□□□ 0.36
PCK1P35558 RPL13AP23-201ENST00000480739 586 ntBASIC17.3■□□□□ 0.36
PCK1P35558 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.3■□□□□ 0.36
PCK1P35558 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.3■□□□□ 0.36
PCK1P35558 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.3■□□□□ 0.36
PCK1P35558 AC023141.13-201ENST00000604991 943 ntBASIC17.3■□□□□ 0.36
PCK1P35558 AC007064.4-201ENST00000637740 555 ntBASIC17.3■□□□□ 0.36
PCK1P35558 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCK1P35558 NORAD-201ENST00000565493 5339 ntBASIC17.3■□□□□ 0.36
PCK1P35558 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCK1P35558 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCK1P35558 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.3■□□□□ 0.36
PCK1P35558 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCK1P35558 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCK1P35558 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCK1P35558 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCK1P35558 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCK1P35558 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCK1P35558 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCK1P35558 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCK1P35558 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCK1P35558 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCK1P35558 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCK1P35558 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCK1P35558 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC17.3■□□□□ 0.36
PCK1P35558 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCK1P35558 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC17.29■□□□□ 0.36
PCK1P35558 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCK1P35558 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.29■□□□□ 0.36
PCK1P35558 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCK1P35558 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCK1P35558 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCK1P35558 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCK1P35558 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.29■□□□□ 0.36
PCK1P35558 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCK1P35558 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCK1P35558 IL9RP2-201ENST00000423948 1312 ntBASIC17.29■□□□□ 0.36
PCK1P35558 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC17.29■□□□□ 0.36
PCK1P35558 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCK1P35558 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCK1P35558 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCK1P35558 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCK1P35558 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
PCK1P35558 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.29■□□□□ 0.36
PCK1P35558 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCK1P35558 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.29■□□□□ 0.36
PCK1P35558 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.29■□□□□ 0.36
PCK1P35558 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.29■□□□□ 0.36
PCK1P35558 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCK1P35558 AC109635.5-201ENST00000533593 962 ntBASIC17.29■□□□□ 0.36
PCK1P35558 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.29■□□□□ 0.36
PCK1P35558 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCK1P35558 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.29■□□□□ 0.36
PCK1P35558 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.29■□□□□ 0.36
PCK1P35558 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.29■□□□□ 0.36
PCK1P35558 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.29■□□□□ 0.36
PCK1P35558 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.29■□□□□ 0.36
PCK1P35558 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.29■□□□□ 0.36
PCK1P35558 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.29■□□□□ 0.36
PCK1P35558 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.29■□□□□ 0.36
PCK1P35558 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.29■□□□□ 0.36
PCK1P35558 AL121894.2-201ENST00000602977 491 ntBASIC17.29■□□□□ 0.36
PCK1P35558 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.29■□□□□ 0.36
PCK1P35558 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCK1P35558 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCK1P35558 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCK1P35558 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.29■□□□□ 0.36
PCK1P35558 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC17.29■□□□□ 0.36
PCK1P35558 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
PCK1P35558 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.29■□□□□ 0.36
PCK1P35558 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms