Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.69■□□□□ 0.58
CLCN1P35523 STK25P1-201ENST00000585406 838 ntBASIC18.69■□□□□ 0.58
CLCN1P35523 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.69■□□□□ 0.58
CLCN1P35523 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CLCN1P35523 AC092119.3-201ENST00000612618 583 ntBASIC18.69■□□□□ 0.58
CLCN1P35523 AD001527.2-201ENST00000622994 785 ntBASIC18.69■□□□□ 0.58
CLCN1P35523 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLCN1P35523 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLCN1P35523 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLCN1P35523 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLCN1P35523 POR-201ENST00000394893 2532 ntTSL 5 BASIC18.69■□□□□ 0.58
CLCN1P35523 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLCN1P35523 AC010327.5-201ENST00000586923 3061 ntBASIC18.69■□□□□ 0.58
CLCN1P35523 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC18.69■□□□□ 0.58
CLCN1P35523 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLCN1P35523 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC18.69■□□□□ 0.58
CLCN1P35523 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLCN1P35523 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CLCN1P35523 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLCN1P35523 CDC14C-201ENST00000428251 1719 ntBASIC18.69■□□□□ 0.58
CLCN1P35523 GGT4P-201ENST00000623672 1708 ntBASIC18.69■□□□□ 0.58
CLCN1P35523 OS9-207ENST00000439210 1946 ntTSL 2 BASIC18.68■□□□□ 0.58
CLCN1P35523 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLCN1P35523 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLCN1P35523 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC18.68■□□□□ 0.58
CLCN1P35523 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLCN1P35523 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLCN1P35523 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLCN1P35523 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLCN1P35523 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLCN1P35523 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.68■□□□□ 0.58
CLCN1P35523 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CLCN1P35523 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CLCN1P35523 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CLCN1P35523 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CLCN1P35523 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC18.68■□□□□ 0.58
CLCN1P35523 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC18.68■□□□□ 0.58
CLCN1P35523 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC18.68■□□□□ 0.58
CLCN1P35523 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC18.68■□□□□ 0.58
CLCN1P35523 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLCN1P35523 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
CLCN1P35523 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CLCN1P35523 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
CLCN1P35523 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
CLCN1P35523 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.68■□□□□ 0.58
CLCN1P35523 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
CLCN1P35523 MINOS1P3-201ENST00000457048 203 ntBASIC18.68■□□□□ 0.58
CLCN1P35523 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.68■□□□□ 0.58
CLCN1P35523 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.68■□□□□ 0.58
CLCN1P35523 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CLCN1P35523 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC18.68■□□□□ 0.58
CLCN1P35523 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC18.68■□□□□ 0.58
CLCN1P35523 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.68■□□□□ 0.58
CLCN1P35523 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC18.68■□□□□ 0.58
CLCN1P35523 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.68■□□□□ 0.58
CLCN1P35523 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLCN1P35523 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLCN1P35523 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC18.67■□□□□ 0.58
CLCN1P35523 AC107918.4-201ENST00000641966 3141 ntBASIC18.67■□□□□ 0.58
CLCN1P35523 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CLCN1P35523 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CLCN1P35523 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC18.67■□□□□ 0.58
CLCN1P35523 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLCN1P35523 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CLCN1P35523 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CLCN1P35523 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CLCN1P35523 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLCN1P35523 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CLCN1P35523 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLCN1P35523 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLCN1P35523 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLCN1P35523 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLCN1P35523 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC18.67■□□□□ 0.58
CLCN1P35523 TMBIM7P-203ENST00000641617 1718 ntBASIC18.67■□□□□ 0.58
CLCN1P35523 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CLCN1P35523 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.67■□□□□ 0.58
CLCN1P35523 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CLCN1P35523 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLCN1P35523 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
CLCN1P35523 AP000867.3-201ENST00000524675 377 ntBASIC18.67■□□□□ 0.58
CLCN1P35523 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.67■□□□□ 0.58
CLCN1P35523 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.67■□□□□ 0.58
CLCN1P35523 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CLCN1P35523 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLCN1P35523 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CLCN1P35523 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.67■□□□□ 0.58
CLCN1P35523 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLCN1P35523 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLCN1P35523 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
CLCN1P35523 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CLCN1P35523 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC18.67■□□□□ 0.58
CLCN1P35523 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLCN1P35523 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLCN1P35523 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CLCN1P35523 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CLCN1P35523 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
CLCN1P35523 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
CLCN1P35523 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLCN1P35523 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
CLCN1P35523 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms