Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC16.74■□□□□ 0.27
SLC6A4P31645 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC16.74■□□□□ 0.27
SLC6A4P31645 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.74■□□□□ 0.27
SLC6A4P31645 AL662844.4-201ENST00000606367 2838 ntBASIC16.74■□□□□ 0.27
SLC6A4P31645 AC092364.2-201ENST00000596710 2692 ntBASIC16.74■□□□□ 0.27
SLC6A4P31645 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC6A4P31645 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
SLC6A4P31645 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC6A4P31645 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.74■□□□□ 0.27
SLC6A4P31645 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.74■□□□□ 0.27
SLC6A4P31645 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
SLC6A4P31645 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
SLC6A4P31645 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC6A4P31645 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.73■□□□□ 0.27
SLC6A4P31645 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.73■□□□□ 0.27
SLC6A4P31645 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC6A4P31645 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SLC6A4P31645 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC16.73■□□□□ 0.27
SLC6A4P31645 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC6A4P31645 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SLC6A4P31645 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
SLC6A4P31645 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.73■□□□□ 0.27
SLC6A4P31645 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.73■□□□□ 0.27
SLC6A4P31645 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.73■□□□□ 0.27
SLC6A4P31645 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16.73■□□□□ 0.27
SLC6A4P31645 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SLC6A4P31645 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SLC6A4P31645 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC6A4P31645 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC6A4P31645 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC6A4P31645 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.73■□□□□ 0.27
SLC6A4P31645 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.73■□□□□ 0.27
SLC6A4P31645 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.73■□□□□ 0.27
SLC6A4P31645 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
SLC6A4P31645 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.73■□□□□ 0.27
SLC6A4P31645 RPL37AP1-201ENST00000412502 279 ntBASIC16.73■□□□□ 0.27
SLC6A4P31645 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.73■□□□□ 0.27
SLC6A4P31645 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SLC6A4P31645 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC16.73■□□□□ 0.27
SLC6A4P31645 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SLC6A4P31645 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SLC6A4P31645 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.73■□□□□ 0.27
SLC6A4P31645 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SLC6A4P31645 AL096865.1-201ENST00000606796 927 ntBASIC16.73■□□□□ 0.27
SLC6A4P31645 AL365330.1-201ENST00000607459 531 ntBASIC16.73■□□□□ 0.27
SLC6A4P31645 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.73■□□□□ 0.27
SLC6A4P31645 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC6A4P31645 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
SLC6A4P31645 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
SLC6A4P31645 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC6A4P31645 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC6A4P31645 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
SLC6A4P31645 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.73■□□□□ 0.27
SLC6A4P31645 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.73■□□□□ 0.27
SLC6A4P31645 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
SLC6A4P31645 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC6A4P31645 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SLC6A4P31645 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.73■□□□□ 0.27
SLC6A4P31645 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
SLC6A4P31645 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
SLC6A4P31645 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SLC6A4P31645 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC6A4P31645 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC6A4P31645 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC6A4P31645 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.72■□□□□ 0.27
SLC6A4P31645 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SLC6A4P31645 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC6A4P31645 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC6A4P31645 AC100757.3-201ENST00000622361 1406 ntBASIC16.72■□□□□ 0.27
SLC6A4P31645 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.72■□□□□ 0.27
SLC6A4P31645 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SLC6A4P31645 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC6A4P31645 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
SLC6A4P31645 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
SLC6A4P31645 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC6A4P31645 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC6A4P31645 BASP1P1-201ENST00000430708 665 ntBASIC16.72■□□□□ 0.27
SLC6A4P31645 HLA-V-204ENST00000476601 1289 ntBASIC16.72■□□□□ 0.27
SLC6A4P31645 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16.72■□□□□ 0.27
SLC6A4P31645 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.72■□□□□ 0.27
SLC6A4P31645 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.72■□□□□ 0.27
SLC6A4P31645 AL589739.1-201ENST00000607720 493 ntBASIC16.72■□□□□ 0.27
SLC6A4P31645 AL590560.3-201ENST00000623350 461 ntBASIC16.72■□□□□ 0.27
SLC6A4P31645 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
SLC6A4P31645 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.72■□□□□ 0.27
SLC6A4P31645 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC6A4P31645 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC16.72■□□□□ 0.27
SLC6A4P31645 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SLC6A4P31645 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC6A4P31645 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.72■□□□□ 0.27
SLC6A4P31645 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.72■□□□□ 0.27
SLC6A4P31645 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.72■□□□□ 0.27
SLC6A4P31645 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SLC6A4P31645 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC6A4P31645 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SLC6A4P31645 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SLC6A4P31645 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.72■□□□□ 0.27
SLC6A4P31645 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC6A4P31645 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.72■□□□□ 0.27
SLC6A4P31645 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms