Protein–RNA interactions for Protein: P31025

LCN1, Lipocalin-1, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P31025 AKAP8P1-201ENST00000434743 1349 ntBASIC15.2■□□□□ 0.02
LCN1P31025 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LCN1P31025 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LCN1P31025 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
LCN1P31025 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LCN1P31025 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LCN1P31025 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LCN1P31025 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
LCN1P31025 MTHFR-217ENST00000641820 1569 ntBASIC15.2■□□□□ 0.02
LCN1P31025 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LCN1P31025 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LCN1P31025 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC15.2■□□□□ 0.02
LCN1P31025 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LCN1P31025 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
LCN1P31025 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LCN1P31025 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LCN1P31025 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LCN1P31025 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LCN1P31025 ACTG1P14-201ENST00000446382 1122 ntBASIC15.2■□□□□ 0.02
LCN1P31025 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
LCN1P31025 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
LCN1P31025 PGAM5P1-201ENST00000518923 814 ntBASIC15.2■□□□□ 0.02
LCN1P31025 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LCN1P31025 QPRT-203ENST00000562473 579 ntTSL 3 BASIC15.2■□□□□ 0.02
LCN1P31025 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC15.2■□□□□ 0.02
LCN1P31025 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC15.2■□□□□ 0.02
LCN1P31025 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC15.2■□□□□ 0.02
LCN1P31025 AC092850.2-201ENST00000623821 2697 ntBASIC15.2■□□□□ 0.02
LCN1P31025 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LCN1P31025 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
LCN1P31025 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.2■□□□□ 0.02
LCN1P31025 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.2■□□□□ 0.02
LCN1P31025 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LCN1P31025 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LCN1P31025 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LCN1P31025 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LCN1P31025 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.2■□□□□ 0.02
LCN1P31025 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
LCN1P31025 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LCN1P31025 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.2■□□□□ 0.02
LCN1P31025 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.2■□□□□ 0.02
LCN1P31025 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.2■□□□□ 0.02
LCN1P31025 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LCN1P31025 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LCN1P31025 CA12-203ENST00000422263 2556 ntTSL 2 BASIC15.2■□□□□ 0.02
LCN1P31025 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
LCN1P31025 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
LCN1P31025 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LCN1P31025 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.2■□□□□ 0.02
LCN1P31025 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.19■□□□□ 0.02
LCN1P31025 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LCN1P31025 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
LCN1P31025 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LCN1P31025 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC15.19■□□□□ 0.02
LCN1P31025 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LCN1P31025 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
LCN1P31025 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC15.19■□□□□ 0.02
LCN1P31025 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
LCN1P31025 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LCN1P31025 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
LCN1P31025 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.19■□□□□ 0.02
LCN1P31025 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
LCN1P31025 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LCN1P31025 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LCN1P31025 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.19■□□□□ 0.02
LCN1P31025 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC15.19■□□□□ 0.02
LCN1P31025 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LCN1P31025 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC15.19■□□□□ 0.02
LCN1P31025 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC15.19■□□□□ 0.02
LCN1P31025 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
LCN1P31025 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
LCN1P31025 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC15.19■□□□□ 0.02
LCN1P31025 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
LCN1P31025 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC15.19■□□□□ 0.02
LCN1P31025 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.19■□□□□ 0.02
LCN1P31025 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC15.19■□□□□ 0.02
LCN1P31025 MTDHP5-201ENST00000598980 586 ntBASIC15.19■□□□□ 0.02
LCN1P31025 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC15.19■□□□□ 0.02
LCN1P31025 AC092865.6-201ENST00000642101 219 ntBASIC15.19■□□□□ 0.02
LCN1P31025 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.19■□□□□ 0.02
LCN1P31025 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.19■□□□□ 0.02
LCN1P31025 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.19■□□□□ 0.02
LCN1P31025 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LCN1P31025 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LCN1P31025 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LCN1P31025 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LCN1P31025 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
LCN1P31025 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LCN1P31025 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.19■□□□□ 0.02
LCN1P31025 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LCN1P31025 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
LCN1P31025 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LCN1P31025 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LCN1P31025 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
LCN1P31025 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.19■□□□□ 0.02
LCN1P31025 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LCN1P31025 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LCN1P31025 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LCN1P31025 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.18■□□□□ 0.02
LCN1P31025 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms