Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 AC026150.2-201ENST00000564693 1156 ntBASIC16.52■□□□□ 0.24
XPAP23025 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
XPAP23025 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
XPAP23025 Z92544.3-201ENST00000624747 417 ntBASIC16.52■□□□□ 0.24
XPAP23025 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.52■□□□□ 0.24
XPAP23025 AC084121.4-201ENST00000641598 221 ntBASIC16.52■□□□□ 0.24
XPAP23025 AF228730.8-201ENST00000642140 221 ntBASIC16.52■□□□□ 0.24
XPAP23025 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
XPAP23025 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC16.52■□□□□ 0.23
XPAP23025 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
XPAP23025 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
XPAP23025 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
XPAP23025 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
XPAP23025 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
XPAP23025 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.23
XPAP23025 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.23
XPAP23025 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
XPAP23025 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
XPAP23025 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
XPAP23025 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.52■□□□□ 0.23
XPAP23025 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.52■□□□□ 0.23
XPAP23025 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
XPAP23025 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
XPAP23025 AC126755.1-201ENST00000525846 6405 ntBASIC16.51■□□□□ 0.23
XPAP23025 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
XPAP23025 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
XPAP23025 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.51■□□□□ 0.23
XPAP23025 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
XPAP23025 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
XPAP23025 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
XPAP23025 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
XPAP23025 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
XPAP23025 LINC01144-201ENST00000626198 1710 ntBASIC16.51■□□□□ 0.23
XPAP23025 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
XPAP23025 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
XPAP23025 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
XPAP23025 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
XPAP23025 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.51■□□□□ 0.23
XPAP23025 GGT3P-204ENST00000453783 1664 ntBASIC16.51■□□□□ 0.23
XPAP23025 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.51■□□□□ 0.23
XPAP23025 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
XPAP23025 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
XPAP23025 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
XPAP23025 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
XPAP23025 HLA-H-201ENST00000383620 1096 ntBASIC16.51■□□□□ 0.23
XPAP23025 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.51■□□□□ 0.23
XPAP23025 AC142381.1-201ENST00000426099 345 ntBASIC16.51■□□□□ 0.23
XPAP23025 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.51■□□□□ 0.23
XPAP23025 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC16.51■□□□□ 0.23
XPAP23025 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.51■□□□□ 0.23
XPAP23025 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
XPAP23025 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.51■□□□□ 0.23
XPAP23025 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.51■□□□□ 0.23
XPAP23025 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.51■□□□□ 0.23
XPAP23025 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.51■□□□□ 0.23
XPAP23025 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.51■□□□□ 0.23
XPAP23025 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.51■□□□□ 0.23
XPAP23025 ORC5-208ENST00000626700 344 ntTSL 3 BASIC16.51■□□□□ 0.23
XPAP23025 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.51■□□□□ 0.23
XPAP23025 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
XPAP23025 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
XPAP23025 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.51■□□□□ 0.23
XPAP23025 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
XPAP23025 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
XPAP23025 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
XPAP23025 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.51■□□□□ 0.23
XPAP23025 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
XPAP23025 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.51■□□□□ 0.23
XPAP23025 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.51■□□□□ 0.23
XPAP23025 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
XPAP23025 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
XPAP23025 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
XPAP23025 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
XPAP23025 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.5■□□□□ 0.23
XPAP23025 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
XPAP23025 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.5■□□□□ 0.23
XPAP23025 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
XPAP23025 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
XPAP23025 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.5■□□□□ 0.23
XPAP23025 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
XPAP23025 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
XPAP23025 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
XPAP23025 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
XPAP23025 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
XPAP23025 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
XPAP23025 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
XPAP23025 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
XPAP23025 GPS2P2-201ENST00000430745 888 ntBASIC16.5■□□□□ 0.23
XPAP23025 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.5■□□□□ 0.23
XPAP23025 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.5■□□□□ 0.23
XPAP23025 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.5■□□□□ 0.23
XPAP23025 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.5■□□□□ 0.23
XPAP23025 AC098859.1-201ENST00000502915 1238 ntBASIC16.5■□□□□ 0.23
XPAP23025 RNA5SP410-201ENST00000516285 106 ntBASIC16.5■□□□□ 0.23
XPAP23025 RFPL4AP1-201ENST00000530883 850 ntBASIC16.5■□□□□ 0.23
XPAP23025 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.5■□□□□ 0.23
XPAP23025 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.5■□□□□ 0.23
XPAP23025 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.5■□□□□ 0.23
XPAP23025 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
XPAP23025 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms