Protein–RNA interactions for Protein: P16615

ATP2A2, Sarcoplasmic/endoplasmic reticulum calcium ATPase 2, humanhuman

Known RBP Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2P16615 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ATP2A2P16615 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.1■□□□□ 0.49
ATP2A2P16615 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ATP2A2P16615 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
ATP2A2P16615 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC18.1■□□□□ 0.49
ATP2A2P16615 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.1■□□□□ 0.49
ATP2A2P16615 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ATP2A2P16615 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ATP2A2P16615 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ATP2A2P16615 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
ATP2A2P16615 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
ATP2A2P16615 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ATP2A2P16615 AL035456.1-201ENST00000456064 1369 ntBASIC18.1■□□□□ 0.49
ATP2A2P16615 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
ATP2A2P16615 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
ATP2A2P16615 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
ATP2A2P16615 AC087499.5-201ENST00000452760 1342 ntBASIC18.1■□□□□ 0.49
ATP2A2P16615 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ATP2A2P16615 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ATP2A2P16615 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ATP2A2P16615 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
ATP2A2P16615 PP14571-201ENST00000404327 934 ntTSL 2 BASIC18.1■□□□□ 0.49
ATP2A2P16615 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC18.1■□□□□ 0.49
ATP2A2P16615 INE1-201ENST00000456273 945 ntBASIC18.1■□□□□ 0.49
ATP2A2P16615 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC18.1■□□□□ 0.49
ATP2A2P16615 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ATP2A2P16615 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ATP2A2P16615 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ATP2A2P16615 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
ATP2A2P16615 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
ATP2A2P16615 LYSMD4-203ENST00000378904 2122 ntBASIC18.1■□□□□ 0.49
ATP2A2P16615 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ATP2A2P16615 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.1■□□□□ 0.49
ATP2A2P16615 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ATP2A2P16615 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ATP2A2P16615 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ATP2A2P16615 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ATP2A2P16615 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
ATP2A2P16615 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ATP2A2P16615 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC18.09■□□□□ 0.49
ATP2A2P16615 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
ATP2A2P16615 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
ATP2A2P16615 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC18.09■□□□□ 0.49
ATP2A2P16615 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ATP2A2P16615 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ATP2A2P16615 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC18.09■□□□□ 0.49
ATP2A2P16615 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ATP2A2P16615 PGF-202ENST00000405431 666 ntTSL 5 BASIC18.09■□□□□ 0.49
ATP2A2P16615 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC18.09■□□□□ 0.49
ATP2A2P16615 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC18.09■□□□□ 0.49
ATP2A2P16615 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
ATP2A2P16615 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ATP2A2P16615 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ATP2A2P16615 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC18.09■□□□□ 0.49
ATP2A2P16615 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
ATP2A2P16615 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC18.09■□□□□ 0.49
ATP2A2P16615 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC18.09■□□□□ 0.49
ATP2A2P16615 PRR29-204ENST00000577953 565 ntTSL 4 BASIC18.09■□□□□ 0.49
ATP2A2P16615 TEX28P1-201ENST00000613479 1221 ntBASIC18.09■□□□□ 0.49
ATP2A2P16615 TEX28P2-201ENST00000617764 1221 ntBASIC18.09■□□□□ 0.49
ATP2A2P16615 IGHV3-72-202ENST00000621503 303 ntBASIC18.09■□□□□ 0.49
ATP2A2P16615 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC18.09■□□□□ 0.49
ATP2A2P16615 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
ATP2A2P16615 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.09■□□□□ 0.49
ATP2A2P16615 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC18.09■□□□□ 0.49
ATP2A2P16615 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
ATP2A2P16615 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
ATP2A2P16615 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ATP2A2P16615 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
ATP2A2P16615 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC18.09■□□□□ 0.49
ATP2A2P16615 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
ATP2A2P16615 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ATP2A2P16615 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ATP2A2P16615 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ATP2A2P16615 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ATP2A2P16615 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC18.08■□□□□ 0.49
ATP2A2P16615 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
ATP2A2P16615 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ATP2A2P16615 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
ATP2A2P16615 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC18.08■□□□□ 0.49
ATP2A2P16615 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
ATP2A2P16615 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC18.08■□□□□ 0.49
ATP2A2P16615 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ATP2A2P16615 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
ATP2A2P16615 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.49
ATP2A2P16615 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.49
ATP2A2P16615 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
ATP2A2P16615 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
ATP2A2P16615 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ATP2A2P16615 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC18.08■□□□□ 0.49
ATP2A2P16615 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.49
ATP2A2P16615 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ATP2A2P16615 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC18.08■□□□□ 0.48
ATP2A2P16615 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
ATP2A2P16615 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ATP2A2P16615 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ATP2A2P16615 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ATP2A2P16615 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
ATP2A2P16615 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
ATP2A2P16615 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms