Protein–RNA interactions for Protein: P11836

MS4A1, B-lymphocyte antigen CD20, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A1P11836 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC21.06■□□□□ 0.96
MS4A1P11836 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC21.06■□□□□ 0.96
MS4A1P11836 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
MS4A1P11836 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC21.06■□□□□ 0.96
MS4A1P11836 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
MS4A1P11836 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
MS4A1P11836 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC21.06■□□□□ 0.96
MS4A1P11836 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
MS4A1P11836 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
MS4A1P11836 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC21.06■□□□□ 0.96
MS4A1P11836 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
MS4A1P11836 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC21.06■□□□□ 0.96
MS4A1P11836 FALEC-201ENST00000416894 566 ntTSL 3 BASIC21.06■□□□□ 0.96
MS4A1P11836 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC21.06■□□□□ 0.96
MS4A1P11836 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC21.06■□□□□ 0.96
MS4A1P11836 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
MS4A1P11836 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
MS4A1P11836 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
MS4A1P11836 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC21.06■□□□□ 0.96
MS4A1P11836 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC21.06■□□□□ 0.96
MS4A1P11836 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
MS4A1P11836 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
MS4A1P11836 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
MS4A1P11836 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
MS4A1P11836 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
MS4A1P11836 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
MS4A1P11836 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC21.06■□□□□ 0.96
MS4A1P11836 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
MS4A1P11836 BID-213ENST00000615414 2236 ntTSL 5 BASIC21.05■□□□□ 0.96
MS4A1P11836 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
MS4A1P11836 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC21.05■□□□□ 0.96
MS4A1P11836 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MS4A1P11836 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
MS4A1P11836 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC21.05■□□□□ 0.96
MS4A1P11836 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
MS4A1P11836 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MS4A1P11836 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
MS4A1P11836 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MS4A1P11836 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC21.05■□□□□ 0.96
MS4A1P11836 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC21.05■□□□□ 0.96
MS4A1P11836 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MS4A1P11836 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MS4A1P11836 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MS4A1P11836 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
MS4A1P11836 CRCP-205ENST00000431089 942 ntTSL 2 BASIC21.05■□□□□ 0.96
MS4A1P11836 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC21.05■□□□□ 0.96
MS4A1P11836 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC21.05■□□□□ 0.96
MS4A1P11836 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC21.05■□□□□ 0.96
MS4A1P11836 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC21.05■□□□□ 0.96
MS4A1P11836 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
MS4A1P11836 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC21.05■□□□□ 0.96
MS4A1P11836 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC21.05■□□□□ 0.96
MS4A1P11836 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
MS4A1P11836 AQP6-205ENST00000618286 829 ntTSL 5 BASIC21.05■□□□□ 0.96
MS4A1P11836 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC21.05■□□□□ 0.96
MS4A1P11836 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MS4A1P11836 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
MS4A1P11836 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
MS4A1P11836 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MS4A1P11836 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
MS4A1P11836 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
MS4A1P11836 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
MS4A1P11836 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC21.04■□□□□ 0.96
MS4A1P11836 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
MS4A1P11836 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC21.04■□□□□ 0.96
MS4A1P11836 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
MS4A1P11836 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
MS4A1P11836 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC21.04■□□□□ 0.96
MS4A1P11836 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC21.04■□□□□ 0.96
MS4A1P11836 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
MS4A1P11836 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC21.04■□□□□ 0.96
MS4A1P11836 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC21.04■□□□□ 0.96
MS4A1P11836 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
MS4A1P11836 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
MS4A1P11836 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC21.04■□□□□ 0.96
MS4A1P11836 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
MS4A1P11836 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
MS4A1P11836 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
MS4A1P11836 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
MS4A1P11836 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
MS4A1P11836 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC21.04■□□□□ 0.96
MS4A1P11836 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
MS4A1P11836 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC21.04■□□□□ 0.96
MS4A1P11836 AC034105.1-201ENST00000563488 319 ntBASIC21.04■□□□□ 0.96
MS4A1P11836 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC21.04■□□□□ 0.96
MS4A1P11836 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
MS4A1P11836 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC21.04■□□□□ 0.96
MS4A1P11836 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC21.04■□□□□ 0.96
MS4A1P11836 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
MS4A1P11836 AL009183.1-201ENST00000603760 355 ntBASIC21.04■□□□□ 0.96
MS4A1P11836 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
MS4A1P11836 REXO1L8P-201ENST00000604378 1897 ntBASIC21.04■□□□□ 0.96
MS4A1P11836 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC21.04■□□□□ 0.96
MS4A1P11836 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
MS4A1P11836 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
MS4A1P11836 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
MS4A1P11836 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC21.04■□□□□ 0.96
MS4A1P11836 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
MS4A1P11836 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC21.04■□□□□ 0.96
MS4A1P11836 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms