Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 RARRES2P9-201ENST00000565168 469 ntBASIC19.23■□□□□ 0.67
TOP1P11387 AL355385.1-201ENST00000606123 409 ntBASIC19.23■□□□□ 0.67
TOP1P11387 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TOP1P11387 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
TOP1P11387 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TOP1P11387 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TOP1P11387 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
TOP1P11387 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TOP1P11387 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TOP1P11387 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TOP1P11387 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TOP1P11387 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TOP1P11387 AC046158.3-201ENST00000624947 2558 ntBASIC19.23■□□□□ 0.67
TOP1P11387 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TOP1P11387 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TOP1P11387 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TOP1P11387 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TOP1P11387 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC19.22■□□□□ 0.67
TOP1P11387 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TOP1P11387 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TOP1P11387 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC19.22■□□□□ 0.67
TOP1P11387 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TOP1P11387 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TOP1P11387 AL139384.1-201ENST00000612143 3047 ntBASIC19.22■□□□□ 0.67
TOP1P11387 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TOP1P11387 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
TOP1P11387 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
TOP1P11387 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
TOP1P11387 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TOP1P11387 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TOP1P11387 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
TOP1P11387 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
TOP1P11387 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TOP1P11387 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TOP1P11387 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TOP1P11387 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TOP1P11387 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TOP1P11387 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TOP1P11387 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC19.22■□□□□ 0.67
TOP1P11387 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC19.22■□□□□ 0.67
TOP1P11387 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TOP1P11387 AC067863.1-201ENST00000494933 530 ntBASIC19.22■□□□□ 0.67
TOP1P11387 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TOP1P11387 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TOP1P11387 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
TOP1P11387 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TOP1P11387 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC19.22■□□□□ 0.67
TOP1P11387 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TOP1P11387 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TOP1P11387 AC008677.1-201ENST00000519230 1561 ntBASIC19.22■□□□□ 0.67
TOP1P11387 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TOP1P11387 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TOP1P11387 LINC01144-201ENST00000626198 1710 ntBASIC19.22■□□□□ 0.67
TOP1P11387 GOLGA2P9-201ENST00000596977 1937 ntBASIC19.21■□□□□ 0.67
TOP1P11387 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC19.21■□□□□ 0.67
TOP1P11387 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TOP1P11387 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
TOP1P11387 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TOP1P11387 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC19.21■□□□□ 0.67
TOP1P11387 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TOP1P11387 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC19.21■□□□□ 0.67
TOP1P11387 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TOP1P11387 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TOP1P11387 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TOP1P11387 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
TOP1P11387 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TOP1P11387 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TOP1P11387 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TOP1P11387 FAM220BP-201ENST00000377689 816 ntBASIC19.21■□□□□ 0.67
TOP1P11387 HLA-H-201ENST00000383620 1096 ntBASIC19.21■□□□□ 0.67
TOP1P11387 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TOP1P11387 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC19.21■□□□□ 0.67
TOP1P11387 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC19.21■□□□□ 0.67
TOP1P11387 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TOP1P11387 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC19.21■□□□□ 0.67
TOP1P11387 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC19.21■□□□□ 0.67
TOP1P11387 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TOP1P11387 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TOP1P11387 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC19.21■□□□□ 0.67
TOP1P11387 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TOP1P11387 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
TOP1P11387 TUBB3P1-201ENST00000405796 1332 ntBASIC19.21■□□□□ 0.67
TOP1P11387 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TOP1P11387 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC19.21■□□□□ 0.67
TOP1P11387 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
TOP1P11387 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
TOP1P11387 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TOP1P11387 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TOP1P11387 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
TOP1P11387 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TOP1P11387 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TOP1P11387 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC19.2■□□□□ 0.66
TOP1P11387 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TOP1P11387 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
TOP1P11387 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TOP1P11387 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TOP1P11387 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC19.2■□□□□ 0.66
TOP1P11387 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC19.2■□□□□ 0.66
TOP1P11387 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TOP1P11387 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms