Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
SFTPBP07988 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC14.33□□□□□ -0.12
SFTPBP07988 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
SFTPBP07988 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC14.33□□□□□ -0.12
SFTPBP07988 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SFTPBP07988 AC008735.5-201ENST00000623544 497 ntBASIC14.33□□□□□ -0.12
SFTPBP07988 AC107918.4-202ENST00000641623 219 ntBASIC14.33□□□□□ -0.12
SFTPBP07988 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SFTPBP07988 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SFTPBP07988 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SFTPBP07988 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SFTPBP07988 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SFTPBP07988 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SFTPBP07988 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC14.33□□□□□ -0.12
SFTPBP07988 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SFTPBP07988 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC14.33□□□□□ -0.12
SFTPBP07988 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SFTPBP07988 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
SFTPBP07988 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SFTPBP07988 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.33□□□□□ -0.12
SFTPBP07988 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
SFTPBP07988 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SFTPBP07988 AC105917.1-201ENST00000506637 2539 ntBASIC14.33□□□□□ -0.12
SFTPBP07988 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SFTPBP07988 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SFTPBP07988 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SFTPBP07988 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.32□□□□□ -0.12
SFTPBP07988 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SFTPBP07988 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.32□□□□□ -0.12
SFTPBP07988 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
SFTPBP07988 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SFTPBP07988 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SFTPBP07988 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC14.32□□□□□ -0.12
SFTPBP07988 AP002414.3-201ENST00000589352 1468 ntBASIC14.32□□□□□ -0.12
SFTPBP07988 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
SFTPBP07988 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
SFTPBP07988 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC14.32□□□□□ -0.12
SFTPBP07988 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC14.32□□□□□ -0.12
SFTPBP07988 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SFTPBP07988 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SFTPBP07988 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SFTPBP07988 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SFTPBP07988 INIP-202ENST00000374236 874 ntTSL 2 BASIC14.32□□□□□ -0.12
SFTPBP07988 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC14.32□□□□□ -0.12
SFTPBP07988 CENPM-204ENST00000402420 688 ntTSL 5 BASIC14.32□□□□□ -0.12
SFTPBP07988 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SFTPBP07988 PAWRP1-201ENST00000451083 565 ntBASIC14.32□□□□□ -0.12
SFTPBP07988 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SFTPBP07988 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC14.32□□□□□ -0.12
SFTPBP07988 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SFTPBP07988 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC14.32□□□□□ -0.12
SFTPBP07988 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC14.32□□□□□ -0.12
SFTPBP07988 AC013467.2-201ENST00000605472 835 ntBASIC14.32□□□□□ -0.12
SFTPBP07988 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SFTPBP07988 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
SFTPBP07988 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
SFTPBP07988 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SFTPBP07988 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
SFTPBP07988 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.32□□□□□ -0.12
SFTPBP07988 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.32□□□□□ -0.12
SFTPBP07988 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SFTPBP07988 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SFTPBP07988 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC14.32□□□□□ -0.12
SFTPBP07988 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
SFTPBP07988 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.32□□□□□ -0.12
SFTPBP07988 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
SFTPBP07988 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SFTPBP07988 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SFTPBP07988 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
SFTPBP07988 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SFTPBP07988 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
SFTPBP07988 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SFTPBP07988 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SFTPBP07988 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
SFTPBP07988 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SFTPBP07988 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SFTPBP07988 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SFTPBP07988 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SFTPBP07988 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC14.31□□□□□ -0.12
SFTPBP07988 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC14.31□□□□□ -0.12
SFTPBP07988 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC14.31□□□□□ -0.12
SFTPBP07988 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SFTPBP07988 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
SFTPBP07988 LAGE3P1-201ENST00000425356 484 ntBASIC14.31□□□□□ -0.12
SFTPBP07988 AC098831.1-202ENST00000438821 336 ntBASIC14.31□□□□□ -0.12
SFTPBP07988 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SFTPBP07988 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
SFTPBP07988 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC14.31□□□□□ -0.12
SFTPBP07988 RPL13AP23-201ENST00000480739 586 ntBASIC14.31□□□□□ -0.12
SFTPBP07988 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC14.31□□□□□ -0.12
SFTPBP07988 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC14.31□□□□□ -0.12
SFTPBP07988 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC14.31□□□□□ -0.12
SFTPBP07988 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC14.31□□□□□ -0.12
SFTPBP07988 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC14.31□□□□□ -0.12
SFTPBP07988 CYGB-205ENST00000590175 830 ntTSL 3 BASIC14.31□□□□□ -0.12
SFTPBP07988 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC14.31□□□□□ -0.12
SFTPBP07988 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC14.31□□□□□ -0.12
SFTPBP07988 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SFTPBP07988 AC004706.3-202ENST00000621574 984 ntBASIC14.31□□□□□ -0.12
SFTPBP07988 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms